RNA–Protein interactions for RNA: ENST00000616140.1

CPSF1-212, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-212ENST00000616140 SLC25A27O95847 323 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 NNMTP40261 264 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 MYBPC2Q14324 1141 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 RBBP7Q16576 425 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 ANO4Q32M45 955 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 EFHBQ8N7U6 833 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 EXD1Q8NHP7 514 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 TSPAN17Q96FV3 270 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 ZBED2Q9BTP6 218 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 LATS2Q9NRM7 1088 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 DDIT4Q9NX09 232 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 NDUFS3O75489 264 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 HMOX2P30519 316 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 IFNA8P32881 189 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 RAD51Q06609 339 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 CYP24A1Q07973 514 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 INPP5AQ14642 412 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 STYK1Q6J9G0 422 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 ACOT1Q86TX2 421 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 SLC25A41Q8N5S1 370 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 GPATCH2LQ9NWQ4 482 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 PMPCBO75439 489 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 NPTXRO95502 500 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 MYL6P60660 151 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 MCL1Q07820 350 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 TBCCQ15814 346 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 C11orf63Q6NUN7 778 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 C4orf19Q8IY42 314 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 PCYOX1LQ8NBM8 494 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 GLIS3Q8NEA6 775 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 SHCBP1Q8NEM2 672 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 AGBL3Q8NEM8 1001 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 ELMO3Q96BJ8 720 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 PAFAH2Q99487 392 aa14.58□□□□□ -0.08
CPSF1-212ENST00000616140 FAM237AA0A1B0GTK4 181 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 PDE2AO00408 941 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 PSMD3O43242 534 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 UBTFL6P0CB48 400 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 MRPS35P82673 323 aaKnown RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 ITIH4Q14624 930 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 RCN1Q15293 331 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 NAPEPLDQ6IQ20 393 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 SLC30A9Q6PML9 568 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 SYTL5Q8TDW5 730 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 M0QYT0 321 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 MTSS1O43312 755 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 GAS2O43903 313 aaKnown RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 PYGMP11217 842 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 ACO1P21399 889 aaKnown RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 TGM2P21980 687 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 COPAP53621 1224 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 C4orf22Q6V702 233 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 TMC3Q7Z5M5 1100 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 PRUNE1Q86TP1 453 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 VGLL2Q8N8G2 317 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 TFB1MQ8WVM0 346 aaKnown RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 THAP11Q96EK4 314 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 MAGEB18Q96M61 343 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 ZNF446Q9NWS9 450 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 PCDHGB4Q9UN71 923 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 ZNF263O14978 683 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 SLITRK3O94933 977 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 SUPT20HL2P0C7V6 817 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 FAM200BP0CF97 657 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 ABCE1P61221 599 aaKnown RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 VEPH1Q14D04 833 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 THEMIS2Q5TEJ8 643 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 TTC23LQ6PF05 361 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 SPATA17Q96L03 361 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 MMTAG2Q9BU76 263 aaKnown RBP14.57□□□□□ -0.08
CPSF1-212ENST00000616140 KLK14Q9P0G3 267 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 HACL1Q9UJ83 578 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 NAALADL1Q9UQQ1 740 aa14.57□□□□□ -0.08
CPSF1-212ENST00000616140 SV2CQ496J9 727 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 TMEM119Q4V9L6 283 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 RFWD2Q8NHY2 731 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 KIF17Q9P2E2 1029 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 KIF1CO43896 1103 aaKnown RBP14.56□□□□□ -0.08
CPSF1-212ENST00000616140 RPS6KA5O75582 802 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 CYP2C8P10632 490 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 ZNF844Q08AG5 666 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 NOTUMQ6P988 496 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 C16orf89Q6UX73 402 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 SPOCD1Q6ZMY3 1216 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 NT5DC3Q86UY8 548 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 SUGP1Q8IWZ8 645 aaKnown RBP14.56□□□□□ -0.08
CPSF1-212ENST00000616140 TSEN2Q8NCE0 465 aaKnown RBP14.56□□□□□ -0.08
CPSF1-212ENST00000616140 GMCL1P1Q8NEA9 526 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 ADNPQ9H2P0 1102 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 DPP3Q9NY33 737 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.56□□□□□ -0.088e-11■■□□□ 13.1
CPSF1-212ENST00000616140 SCHIP1Q9P0W5 487 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-212ENST00000616140 CDYLQ9Y232 598 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 SLC30A1Q9Y6M5 507 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 ZNF197O14709 1029 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 TMCC1O94876 653 aa14.56□□□□□ -0.08
CPSF1-212ENST00000616140 DPEP1P16444 411 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms