RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 OCM2P0CE71 109 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 OCMP0CE72 109 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SLC5A2P31639 672 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 FDFT1P37268 417 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 ARSEP51690 589 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 ATXN3P54252 364 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 VCPP55072 806 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 GSTM4Q03013 218 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 MSLNQ13421 630 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 UBAP2LQ14157 1087 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SIX1Q15475 284 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 C2CD6Q53TS8 623 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CENPUQ71F23 418 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 AMIGO2Q86SJ2 522 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 LRRC43Q8N309 656 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 RSPH1Q8WYR4 309 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 RUSC1Q9BVN2 902 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 NACA2Q9H009 215 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 IFT122Q9HBG6 1241 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 KLHL11Q9NVR0 708 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 EURLQ9NYK6 297 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 RABGAP1Q9Y3P9 1069 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 COL4A1P02462 1669 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 COL1A1P02452 1464 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 PEX1O43933 1283 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 NELFEP18615 380 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 PHEXP78562 749 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 BBS9Q3SYG4 887 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 TMCO4Q5TGY1 634 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 FOXR2Q6PJQ5 311 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CTAGE3PQ8IX95 158 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 OGFOD1Q8N543 542 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 RNF169Q8NCN4 708 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 NDEL1Q9GZM8 345 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 WWP1Q9H0M0 922 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 BHMT2Q9H2M3 363 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SOX13Q9UN79 622 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SCAF8Q9UPN6 1271 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 EFR3BQ9Y2G0 817 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 KAT6AQ92794 2004 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 FBP2O00757 339 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 FSCN2O14926 492 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 RGL2O15211 777 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 BUD23O43709 281 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 CBFA2T3O75081 653 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 TNFAIP8O95379 198 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 LDHCP07864 332 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 GSTT2P0CG29 244 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 GSTT2BP0CG30 244 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 NMT1P30419 496 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PHBP35232 272 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PSMC6P62333 389 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 DMPKQ09013 629 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 TFDP1Q14186 410 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 TLR1Q15399 786 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 USH1GQ495M9 461 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 RALGPS1Q5JS13 557 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 FBXL19Q6PCT2 694 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 TMC7Q7Z402 723 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 DEPTORQ8TB45 409 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 DRC3Q9H069 523 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PLGRKTQ9HBL7 147 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 UBAP1Q9NZ09 502 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 CCDC88AQ3V6T2 1871 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 TYROBPO43914 113 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 SGPL1O95470 568 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 ETS1P14921 441 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 CD58P19256 250 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 HDAC4P56524 1084 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 ZNF568Q3ZCX4 644 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 DPY19L2P1Q6NXN4 242 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 C3orf62Q6ZUJ4 267 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 NLRX1Q86UT6 975 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 METTL25Q8N6Q8 603 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 VPS11Q9H270 941 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 GPAMQ9HCL2 828 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PROCP04070 461 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 POLR2MP0CAP2 368 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 COL6A2P12110 1019 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 EMP3P54852 163 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 COG2Q14746 738 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 THOC7Q6I9Y2 204 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 UGT2A3Q6UWM9 527 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 THAP11Q96EK4 314 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PAFAH2Q99487 392 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 SLC13A1Q9BZW2 595 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PDGFDQ9GZP0 370 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 TRNAU1APQ9NX07 287 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PCDHA2Q9Y5H9 948 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
TNFAIP3-208ENST00000615468 PI4K2BG5E9Z4 385 aa10.83□□□□□ -0.68
TNFAIP3-208ENST00000615468 CAPN15O75808 1086 aa10.83□□□□□ -0.68
TNFAIP3-208ENST00000615468 SORBS2O94875 1100 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-208ENST00000615468 DLDP09622 509 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms