RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CRBNQ96SW2 442 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MNTQ99583 582 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 LLPHQ9BRT6 129 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 FUCA2Q9BTY2 467 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 OSBPL1AQ9BXW6 950 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CRISPLD1Q9H336 500 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 VTA1Q9NP79 307 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 POLE3Q9NRF9 147 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 DBF4Q9UBU7 674 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SLC13A4Q9UKG4 626 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TRHDEQ9UKU6 1024 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TRIM33Q9UPN9 1127 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PTPN22Q9Y2R2 807 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MED16Q9Y2X0 877 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SESN1Q9Y6P5 492 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 ARAP1Q96P48 1450 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 A0A087X0M5 115 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 A0A1B0GX30 115 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CAPN8A6NHC0 703 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 F8W810 466 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 APOL1O14791 398 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 POLR2DO15514 142 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 STX10O60499 249 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ENDOD1O94919 500 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ANP32DO95626 131 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 GNA14O95837 355 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ITGA2BP08514 1039 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 WEE2P0C1S8 567 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PABPC4LP0CB38 370 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PYGMP11217 842 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 POU2F1P14859 743 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HLA-DPA1P20036 260 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 LPOP22079 712 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ADCY7P51828 1080 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SLC26A5P58743 744 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CHRNEQ04844 493 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TFCP2Q12800 502 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 MXD4Q14582 209 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 EFHC1Q5JVL4 640 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CLVS2Q5SYC1 327 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 C6orf183Q5T699 404 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 VWA5B1Q5TIE3 1220 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SLFN13Q68D06 897 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ARHGAP11AQ6P4F7 1023 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 Q6ZNX1 250 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 EPM2AIP1Q7L775 607 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PHLDB2Q86SQ0 1253 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 LRRC34Q8IZ02 419 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 NUP93Q8N1F7 819 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 GALNT11Q8NCW6 608 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ST13P5Q8NFI4 369 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SLC7A3Q8WY07 619 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 LENG1Q96BZ8 264 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 STAMBPL1Q96FJ0 436 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ZDHHC15Q96MV8 337 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PRAM1Q96QH2 718 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TTC1Q99614 292 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TSG101Q99816 390 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SYT15Q9BQS2 421 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HEPHQ9BQS7 1158 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SDF4Q9BRK5 362 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SIKE1Q9BRV8 207 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CCDC28BQ9BUN5 200 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 NUSAP1Q9BXS6 441 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TFB2MQ9H5Q4 396 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SPON1Q9HCB6 807 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PDE11AQ9HCR9 933 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TM9SF3Q9HD45 589 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ARFGAP3Q9NP61 516 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 KCNMB3Q9NPA1 279 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 RXFP3Q9NSD7 469 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 INTS7Q9NVH2 962 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ARHGEF38Q9NXL2 777 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TNFRSF10DQ9UBN6 386 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 KCNN3Q9UGI6 736 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 RAB21Q9UL25 225 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 RWDD3Q9Y3V2 267 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 LRRC42Q9Y546 428 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 PCDHGA11Q9Y5H2 935 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 COMMD3-BMI1R4GMX3 469 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TNKSO95271 1327 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CDHR2Q9BYE9 1310 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 LOC100653049A0A140TA62 436 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 LRRIQ4A6NIV6 560 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 TRAF5O00463 557 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 EIF3HO15372 352 aaKnown RBP eCLIP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HNRNPRO43390 633 aaKnown RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SRGAP2O75044 1071 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ATP9AO75110 1047 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 KRT34O76011 436 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 DLGAP3O95886 979 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 ZBED1O96006 694 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 CYP1A1P04798 512 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HMGN1P05114 100 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 URODP06132 367 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HEXBP07686 556 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 GSTM1P09488 218 aa3.19□□□□□ -1.9
CBWD3-209ENST00000614377 SP100P23497 879 aaPredicted RBP3.19□□□□□ -1.9
CBWD3-209ENST00000614377 HOXA11P31270 313 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms