RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 RC3H2Q9HBD1 1191 aaKnown RBP15.09■□□□□ 0.01
USP39-220ENST00000613444 DSEQ9UL01 958 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 SNX12Q9UMY4 172 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 PCDHB8Q9UN66 801 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
USP39-220ENST00000613444 GABBR2O75899 941 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 UPP2O95045 317 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 ERBB2P04626 1255 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 ACRP10323 421 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 DEFB103AP81534 67 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 CYP4A22Q5TCH4 519 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 PMF1Q6P1K2 205 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 C16orf59Q7L2K0 433 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 PKMYT1Q99640 499 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 SYT15Q9BQS2 421 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 CDC23Q9UJX2 597 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 CDH9Q9ULB4 789 aa15.09■□□□□ 0.01
USP39-220ENST00000613444 MYBPHLA2RUH7 354 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 GALTP07902 379 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 PRLRP16471 622 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 WDR5P61964 334 aaKnown RBP15.08■□□□□ 0.01
USP39-220ENST00000613444 PDE4CQ08493 712 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 XYLT1Q86Y38 959 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 SYCE1Q8N0S2 351 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 LRRC43Q8N309 656 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 ZNF689Q96CS4 500 aaPredicted RBP15.08■□□□□ 0.01
USP39-220ENST00000613444 C18orf8Q96DM3 657 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 ACBD6Q9BR61 282 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 TMEM175Q9BSA9 504 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 SLC4A5Q9BY07 1137 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 ALG6Q9Y672 507 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 SAR1BQ9Y6B6 198 aa15.08■□□□□ 0.01
USP39-220ENST00000613444 SRGAP2O75044 1071 aa15.08■□□□□ 0
USP39-220ENST00000613444 GJB6O95452 261 aa15.08■□□□□ 0
USP39-220ENST00000613444 ALDH2P05091 517 aa15.08■□□□□ 0
USP39-220ENST00000613444 SETSIPP0DME0 302 aa15.08■□□□□ 0
USP39-220ENST00000613444 ADORA2BP29275 332 aa15.08■□□□□ 0
USP39-220ENST00000613444 RPL34P49207 117 aaKnown RBP15.08■□□□□ 0
USP39-220ENST00000613444 PTPROQ16827 1216 aa15.08■□□□□ 0
USP39-220ENST00000613444 MDH1BQ5I0G3 518 aa15.08■□□□□ 0
USP39-220ENST00000613444 FAM171BQ6P995 826 aa15.08■□□□□ 0
USP39-220ENST00000613444 TMCO2Q7Z6W1 182 aaPredicted RBP15.08■□□□□ 0
USP39-220ENST00000613444 TMEM173Q86WV6 379 aaPredicted RBP15.08■□□□□ 0
USP39-220ENST00000613444 CPNE8Q86YQ8 564 aa15.08■□□□□ 0
USP39-220ENST00000613444 C3orf20Q8ND61 904 aa15.08■□□□□ 0
USP39-220ENST00000613444 OR10T2Q8NGX3 314 aa15.08■□□□□ 0
USP39-220ENST00000613444 STK32AQ8WU08 396 aa15.08■□□□□ 0
USP39-220ENST00000613444 HES6Q96HZ4 224 aa15.08■□□□□ 0
USP39-220ENST00000613444 B3GNT5Q9BYG0 378 aa15.08■□□□□ 0
USP39-220ENST00000613444 CWH43Q9H720 699 aa15.08■□□□□ 0
USP39-220ENST00000613444 IL23AQ9NPF7 189 aa15.08■□□□□ 0
USP39-220ENST00000613444 PARVAQ9NVD7 372 aa15.08■□□□□ 0
USP39-220ENST00000613444 ANAPC7Q9UJX3 599 aa15.08■□□□□ 0
USP39-220ENST00000613444 ADAM28Q9UKQ2 775 aa15.08■□□□□ 0
USP39-220ENST00000613444 HYOU1Q9Y4L1 999 aa15.08■□□□□ 0
USP39-220ENST00000613444 CLDN5O00501 218 aa15.07■□□□□ 0
USP39-220ENST00000613444 PCSK1P29120 753 aa15.07■□□□□ 0
USP39-220ENST00000613444 BCAT1P54687 386 aa15.07■□□□□ 0
USP39-220ENST00000613444 RPL7AP62424 266 aaKnown RBP15.07■□□□□ 0
USP39-220ENST00000613444 PLCB3Q01970 1234 aa15.07■□□□□ 0
USP39-220ENST00000613444 BST2Q10589 180 aaKnown RBP15.07■□□□□ 0
USP39-220ENST00000613444 OVOS1Q6IE37 1185 aa15.07■□□□□ 0
USP39-220ENST00000613444 TMEM110Q86TL2 294 aa15.07■□□□□ 0
USP39-220ENST00000613444 METTL23Q86XA0 190 aa15.07■□□□□ 0
USP39-220ENST00000613444 PCED1BQ96HM7 432 aa15.07■□□□□ 0
USP39-220ENST00000613444 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
USP39-220ENST00000613444 DNAI2Q9GZS0 605 aa15.07■□□□□ 0
USP39-220ENST00000613444 MRPL47Q9HD33 250 aaKnown RBP15.07■□□□□ 0
USP39-220ENST00000613444 HESX1Q9UBX0 185 aa15.07■□□□□ 0
USP39-220ENST00000613444 STRIP2Q9ULQ0 834 aa15.07■□□□□ 0
USP39-220ENST00000613444 SCINQ9Y6U3 715 aa15.07■□□□□ 0
USP39-220ENST00000613444 KIAA1671Q9BY89 1806 aa15.07■□□□□ 0
USP39-220ENST00000613444 ARHGEF37A1IGU5 675 aa15.07■□□□□ 0
USP39-220ENST00000613444 TMEM191CA6NGB0 347 aa15.07■□□□□ 0
USP39-220ENST00000613444 E5RJQ4 531 aa15.07■□□□□ 0
USP39-220ENST00000613444 EFCAB14O75071 495 aa15.07■□□□□ 0
USP39-220ENST00000613444 TADA2AO75478 443 aa15.07■□□□□ 0
USP39-220ENST00000613444 OAZ2O95190 189 aa15.07■□□□□ 0
USP39-220ENST00000613444 EFEMP2O95967 443 aa15.07■□□□□ 0
USP39-220ENST00000613444 PBX3P40426 434 aa15.07■□□□□ 0
USP39-220ENST00000613444 TUBB2AQ13885 445 aa15.07■□□□□ 0
USP39-220ENST00000613444 ZNF268Q14587 947 aaPredicted RBP15.07■□□□□ 0
USP39-220ENST00000613444 MESDQ14696 234 aa15.07■□□□□ 0
USP39-220ENST00000613444 INTS6LQ5JSJ4 861 aaKnown RBP15.07■□□□□ 0
USP39-220ENST00000613444 PEX26Q7Z412 305 aa15.07■□□□□ 0
USP39-220ENST00000613444 FEZF2Q8TBJ5 459 aa15.07■□□□□ 0
USP39-220ENST00000613444 MYCBPAPQ8TBZ2 947 aa15.07■□□□□ 0
USP39-220ENST00000613444 COG1Q8WTW3 980 aa15.07■□□□□ 0
USP39-220ENST00000613444 BCL7CQ8WUZ0 217 aaPredicted RBP15.07■□□□□ 0
USP39-220ENST00000613444 MCRS1Q96EZ8 462 aa15.07■□□□□ 0
USP39-220ENST00000613444 TMEM209Q96SK2 561 aa15.07■□□□□ 0
USP39-220ENST00000613444 OSBPL9Q96SU4 736 aa15.07■□□□□ 0
USP39-220ENST00000613444 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
USP39-220ENST00000613444 FAN1Q9Y2M0 1017 aa15.07■□□□□ 0
USP39-220ENST00000613444 ZNF185O15231 689 aa15.06■□□□□ 0
USP39-220ENST00000613444 BEST1O76090 585 aa15.06■□□□□ 0
USP39-220ENST00000613444 BAIAP3O94812 1187 aa15.06■□□□□ 0
USP39-220ENST00000613444 AMHP03971 560 aa15.06■□□□□ 0
USP39-220ENST00000613444 COMTP21964 271 aa15.06■□□□□ 0
USP39-220ENST00000613444 RGS7P49802 495 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms