RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TMEM221A6NGB7 291 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 PRR33A8MZF0 331 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 M0R296 226 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 MAGEA11P43364 429 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 RPL10AP62906 217 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 CYP27A1Q02318 531 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 CBWD6Q4V339 395 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 CBWD3Q5JTY5 395 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 CBWD5Q5RIA9 395 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 SDHAF4Q5VUM1 108 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 FRMD5Q7Z6J6 570 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 FILIP1Q7Z7B0 1213 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 STKLD1Q8NE28 680 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 FBXL13Q8NEE6 735 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 GPR152Q8TDT2 470 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 SEMA4DQ92854 862 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 LRFN3Q9BTN0 628 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 BCO2Q9BYV7 579 aa19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 MAGEC2Q9UBF1 373 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 NUP210Q8TEM1 1887 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-211ENST00000612509 NARSO43776 548 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 LRRN2O75325 713 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 FGF19O95750 216 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 PTPN1P18031 435 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 GABRR2P28476 465 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 TAF12Q16514 161 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 DDR2Q16832 855 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 GAREM2Q75VX8 874 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 GPT2Q8TD30 523 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 ASIC4Q96FT7 647 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 KXD1Q9BQD3 176 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 IL21Q9HBE4 155 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 HMGXB4Q9UGU5 601 aa19.27■□□□□ 0.68
SEMA3B-211ENST00000612509 GREB1Q4ZG55 1949 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 DENND4CQ5VZ89 1909 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 CSH1P0DML2 217 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 CSH2P0DML3 217 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 HMGA1P17096 107 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 BDNFP23560 247 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 FCARP24071 287 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 CDC25CP30307 473 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 INCA1Q0VD86 236 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 VSTM1Q6UX27 236 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 SCN4BQ8IWT1 228 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 SLC44A3Q8N4M1 653 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 TNIP3Q96KP6 325 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 GCNAQ96QF7 691 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 RPP25Q9BUL9 199 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 SLITRK6Q9H5Y7 841 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 CYP3A43Q9HB55 503 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 RAB20Q9NX57 234 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 RWDD2AQ9UIY3 292 aa19.26■□□□□ 0.67
SEMA3B-211ENST00000612509 NOL4O94818 638 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 SRFP11831 508 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 NDST1P52848 882 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 CYP4F8P98187 520 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 ORC1Q13415 861 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 FAM78AQ5JUQ0 283 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 STXBP5Q5T5C0 1151 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 HFE2Q6ZVN8 426 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 UNC93AQ86WB7 457 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 MLKLQ8NB16 471 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 ZSWIM3Q96MP5 696 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 ASB16Q96NS5 453 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 ZNF518BQ9C0D4 1074 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 ELOVL4Q9GZR5 314 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 ATXN3LQ9H3M9 355 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 MAGED2Q9UNF1 606 aaPredicted RBP19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 COQ4Q9Y3A0 265 aa19.25■□□□□ 0.67
SEMA3B-211ENST00000612509 SLC38A8A6NNN8 435 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 TRIM66O15016 1216 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 ECI2O75521 394 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 GNA14O95837 355 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 ANXA13P27216 316 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 GRIK1P39086 918 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 FMO5P49326 533 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 MARSP56192 900 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 DPCR1Q3MIW9 517 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 ACOT1Q86TX2 421 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 FAM35AQ86V20 835 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 ZSCAN18Q8TBC5 510 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 SMARCD2Q92925 531 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 TWNKQ96RR1 684 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 B3GNT5Q9BYG0 378 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 GPR88Q9GZN0 384 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 ATP8B3O60423 1300 aa19.24■□□□□ 0.67
SEMA3B-211ENST00000612509 CLDN5O00501 218 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 TADA3O75528 432 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 FGFR1OPO95684 399 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 CD58P19256 250 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 CACNA2D1P54289 1103 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 NLRP12P59046 1061 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 ARHGAP15Q53QZ3 475 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 WDR44Q5JSH3 913 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 GPR158Q5T848 1215 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 TANGO2Q6ICL3 276 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 TRIM59Q8IWR1 403 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 ELSPBP1Q96BH3 223 aa19.23■□□□□ 0.67
SEMA3B-211ENST00000612509 TRMT2BQ96GJ1 504 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms