RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MSS51Q4VC12 460 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM133BQ5BKY9 247 aaKnown RBP14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 TRNP1Q6NT89 227 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 SYDE1Q6ZW31 735 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 XYLT1Q86Y38 959 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 ZBED8Q8IZ13 594 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 SPOCK2Q92563 424 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 CENPTQ96BT3 561 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 PDZD7Q9H5P4 517 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 AGAP1Q9UPQ3 857 aa14.83□□□□□ -0.04
PCDHGA3-202ENST00000612467 FSBPO95073 299 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 LSM8O95777 96 aaKnown RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 EIF4BP23588 611 aaKnown RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 EAPPQ56P03 285 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 C4orf33Q8N1A6 199 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 CXorf38Q8TB03 319 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 SERPINB12Q96P63 405 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 PEBP4Q96S96 227 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 ROPN1BQ9BZX4 212 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 C2orf40Q9H1Z8 148 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 VPS37BQ9H9H4 285 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 ROPN1Q9HAT0 212 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 PCDHGC3Q9UN70 934 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 AP3M2P53677 418 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 VCPP55072 806 aaKnown RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 NUGGCQ68CJ6 796 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 TAOK1Q7L7X3 1001 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 CCDC33Q8N5R6 958 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 CCDC197Q8NCU1 140 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 CCT6BQ92526 530 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 HEXIM2Q96MH2 286 aaKnown RBP14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 CALN1Q9BXU9 219 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 HES2Q9Y543 173 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 CEP83Q9Y592 693 aa14.82□□□□□ -0.04
PCDHGA3-202ENST00000612467 HBP1O60381 514 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 SLC25A27O95847 323 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 SCTRP47872 440 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 PTPN11Q06124 597 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 PDIA2Q13087 525 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 TFDP1Q14186 410 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 TTLL4Q14679 1199 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM47EQ6ZV65 393 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 ILDR2Q71H61 639 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 UNC45BQ8IWX7 931 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 C12orf65Q9H3J6 166 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 GPATCH2LQ9NWQ4 482 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 TNFSF13BQ9Y275 285 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 EXOC1LA0A1B0GW35 172 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 MIPP30301 263 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 CDH5P33151 784 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 GRM1Q13255 1194 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 PIGHQ14442 188 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 PKN2Q16513 984 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 GLRA4Q5JXX5 417 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 FNBP1LQ5T0N5 605 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 MAMDC4Q6UXC1 1216 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 YTHDF3Q7Z739 585 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 PIGWQ7Z7B1 504 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 SPATS2Q86XZ4 545 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 NLRP7Q8WX94 980 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 WDR83Q9BRX9 315 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 MAGEB5Q9BZ81 275 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 ERAP1Q9NZ08 941 aa14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 TPX2Q9ULW0 747 aaKnown RBP14.81□□□□□ -0.04
PCDHGA3-202ENST00000612467 RASA4BC9J798 803 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 RASA4O43374 803 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 IBSPP21815 317 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 SSTR1P30872 391 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 NDST1P52848 882 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 YWHAEP62258 255 aaKnown RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM102AQ5T9C2 384 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 RNASEH2BQ5TBB1 312 aaKnown RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 TAPT1Q6NXT6 567 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 ZC3H18Q86VM9 953 aaKnown RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 BCO2Q9BYV7 579 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 HOMER3Q9NSC5 361 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 SCN1AP35498 2009 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 KAT6AQ92794 2004 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 A0A1W2PPM1 405 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 CXCL11O14625 94 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 CILPO75339 1184 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 KDELR1P24390 212 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 ADORA2AP29274 412 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 CETN2P41208 172 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 GCLCP48506 637 aaPredicted RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 ATP11AP98196 1134 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 KIZQ2M2Z5 673 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 RFX6Q8HWS3 928 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 CNPY4Q8N129 248 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM71DQ8N9W8 422 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 HPDLQ96IR7 371 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 SLC40A1Q9NP59 571 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM49BQ9NUQ9 324 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 KCNH4Q9UQ05 1017 aa14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 ATXN2Q99700 1313 aaKnown RBP14.8□□□□□ -0.04
PCDHGA3-202ENST00000612467 FOXN2P32314 431 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CAV1Q03135 178 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 C9orf131Q5VYM1 1079 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms