RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 UGP2Q16851 508 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 KRT80Q6KB66 452 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 KDELC2Q7Z4H8 507 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 CCDC60Q8IWA6 550 aaPredicted RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 TMEM176AQ96HP8 235 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 P2RX7Q99572 595 aaKnown RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 DISP2A7MBM2 1401 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 LTN1O94822 1766 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 NID2Q14112 1375 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 KIF3CO14782 793 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 TRPA1O75762 1119 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 KRT4P19013 534 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 GCLCP48506 637 aaPredicted RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 KDSRQ06136 332 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 NPY5RQ15761 445 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 ARSHQ5FYA8 562 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 TMC3Q7Z5M5 1100 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 AGGF1Q8N302 714 aaeCLIP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 C3orf20Q8ND61 904 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 IL31RAQ8NI17 732 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 ZNF384Q8TF68 577 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 RXFP2Q8WXD0 754 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 GCNAQ96QF7 691 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 CXCL11O14625 94 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 DDNO94850 711 aaPredicted RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 POLBP06746 335 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 SPRP35270 261 aaPredicted RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 AARSP49588 968 aaKnown RBP eCLIP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 ATPAF2Q8N5M1 289 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 TSEN2Q8NCE0 465 aaKnown RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 CCDC124Q96CT7 223 aaKnown RBP8.97□□□□□ -0.97
TMCO1-208ENST00000612311 STAMBPL1Q96FJ0 436 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 GDF3Q9NR23 364 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 TJP2Q9UDY2 1190 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 TCHHQ07283 1943 aa8.97□□□□□ -0.97
TMCO1-208ENST00000612311 ACKR2O00590 384 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 PSMD3O43242 534 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 TGFB1I1O43294 461 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 MTSS1O43312 755 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 TBC1D12O60347 775 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 NCAM1P13591 858 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 EPHB2P29323 1055 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 AMPD2Q01433 879 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 PDK2Q15119 407 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 BMT2Q1RMZ1 405 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 SHROOM1Q2M3G4 852 aaPredicted RBP8.96□□□□□ -0.97
TMCO1-208ENST00000612311 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 ZNF669Q96BR6 464 aaPredicted RBP8.96□□□□□ -0.97
TMCO1-208ENST00000612311 ACP6Q9NPH0 428 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 TAS2R14Q9NYV8 317 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 USP18Q9UMW8 372 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 PPME1Q9Y570 386 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 UBA6A0AVT1 1052 aaPredicted RBP8.96□□□□□ -0.97
TMCO1-208ENST00000612311 M0QYT0 321 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 GNGT2O14610 69 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 SNX2O60749 519 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 ATICP31939 592 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 RPL21P46778 160 aaKnown RBP8.96□□□□□ -0.97
TMCO1-208ENST00000612311 GTF2A2P52657 109 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 NSUN2Q08J23 767 aaKnown RBP eCLIP8.96□□□□□ -0.97
TMCO1-208ENST00000612311 MROH9Q5TGP6 573 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 GLB1LQ6UWU2 654 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 TMEM161BQ8NDZ6 487 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 FBXO36Q8NEA4 188 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 ASAP3Q8TDY4 903 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 FAM172AQ8WUF8 416 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 DCLK3Q9C098 648 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 GPATCH2LQ9NWQ4 482 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 DDIT4Q9NX09 232 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 GRID1Q9ULK0 1009 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 POLIQ9UNA4 740 aa8.96□□□□□ -0.97
TMCO1-208ENST00000612311 ENO1P06733 434 aaKnown RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 ACO1P21399 889 aaKnown RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 CPT1AP50416 773 aa8.96□□□□□ -0.98
TMCO1-208ENST00000612311 ALDH18A1P54886 795 aaKnown RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 USP10Q14694 798 aaKnown RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 TTC39BQ5VTQ0 682 aaPredicted RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 KIF2BQ8N4N8 673 aa8.96□□□□□ -0.98
TMCO1-208ENST00000612311 PPHLN1Q8NEY8 458 aaKnown RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 TRAPPC12Q8WVT3 735 aa8.96□□□□□ -0.98
TMCO1-208ENST00000612311 RMDN1Q96DB5 314 aa8.96□□□□□ -0.98
TMCO1-208ENST00000612311 CPB2Q96IY4 423 aa8.96□□□□□ -0.98
TMCO1-208ENST00000612311 SARS2Q9NP81 518 aaKnown RBP8.96□□□□□ -0.98
TMCO1-208ENST00000612311 ATP9AO75110 1047 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ADRB2P07550 413 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PTGER2P43116 358 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 VCPP55072 806 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 AP2B1P63010 937 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 ZNF844Q08AG5 666 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 RABGAP1LQ5R372 815 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 RFX8Q6ZV50 586 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 IRF2BP2Q7Z5L9 587 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PLEKHH3Q7Z736 793 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 EIF1ADQ8N9N8 165 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 REPS2Q8NFH8 660 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 LNX1Q8TBB1 728 aaPredicted RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 TFB1MQ8WVM0 346 aaKnown RBP8.95□□□□□ -0.98
TMCO1-208ENST00000612311 E2F7Q96AV8 911 aa8.95□□□□□ -0.98
TMCO1-208ENST00000612311 PABPC5Q96DU9 382 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms