RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 WDTC1Q8N5D0 677 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 CPT1BQ92523 772 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 MECRQ9BV79 373 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 DEFB129Q9H1M3 183 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 PLA2G6O60733 806 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 RBP3P10745 1247 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 BGNP21810 368 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 CDKN2BP42772 138 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 IGBP1P78318 339 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 LMNB2Q03252 620 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 MKRN3Q13064 507 aaKnown RBP14.75□□□□□ -0.05
COL6A1-207ENST00000612273 RCN2Q14257 317 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 PTPN20Q4JDL3 420 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 PHF13Q86YI8 300 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-207ENST00000612273 DENND2DQ9H6A0 471 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-207ENST00000612273 PIH1D1Q9NWS0 290 aaKnown RBP14.75□□□□□ -0.05
COL6A1-207ENST00000612273 NR2E3Q9Y5X4 410 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 SERPINB3P29508 390 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 GEMIN4P57678 1058 aaKnown RBP14.75□□□□□ -0.05
COL6A1-207ENST00000612273 NR1H3Q13133 447 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 CAPSQ13938 189 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 PDK4Q16654 411 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 ZNF699Q32M78 642 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 FYB2Q5VWT5 728 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 ABHD15Q6UXT9 468 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 DSTYKQ6XUX3 929 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 TMEM192Q8IY95 271 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 PPM1NQ8N819 430 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 DENND1AQ8TEH3 1009 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 RAB3IPQ96QF0 476 aaPredicted RBP14.75□□□□□ -0.05
COL6A1-207ENST00000612273 ZNRF3Q9ULT6 936 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 SYNPO2Q9UMS6 1093 aa14.75□□□□□ -0.05
COL6A1-207ENST00000612273 B4GALT5O43286 388 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 MT-ND3P03897 115 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ELK3P41970 407 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 BMPR2Q13873 1038 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 SPATA18Q8TC71 538 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 SLC7A6OSQ96CW6 309 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 PPP1R12CQ9BZL4 782 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ASCC2Q9H1I8 757 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 EURLQ9NYK6 297 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 H7C0C1 242 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 SUPT20HL2P0C7V6 817 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 PYGBP11216 843 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ATP5OP48047 213 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 EIF3EP60228 445 aaKnown RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 GNPTABQ3T906 1256 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 SUPT20HL1Q3ZLR7 823 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 CCHCR1Q8TD31 782 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 HMGXB4Q9UGU5 601 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 CYTH4Q9UIA0 394 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 RABGEF1Q9UJ41 708 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 A0A0B4J269 797 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 E2F8A0AVK6 867 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ALOX15BO15296 676 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 LPXNO60711 386 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 OATP04181 439 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ARL4CP56559 192 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 FAAP100Q0VG06 881 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 MOGSQ13724 837 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 OASLQ15646 514 aaKnown RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 KBTBD12Q3ZCT8 623 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 NAIF1Q69YI7 327 aaPredicted RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 VPS52Q8N1B4 723 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 GPRASP2Q96D09 838 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 CGRRF1Q99675 332 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 WDR83Q9BRX9 315 aaKnown RBP14.74□□□□□ -0.05
COL6A1-207ENST00000612273 PICK1Q9NRD5 415 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 ARL8BQ9NVJ2 186 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 SLC5A4Q9NY91 659 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 STARD13Q9Y3M8 1113 aa14.74□□□□□ -0.05
COL6A1-207ENST00000612273 LRRC37AA6NMS7 1700 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 LRCH4O75427 683 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 TOP3BO95985 862 aaKnown RBP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 RGS7P49802 495 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 MORF4L2Q15014 288 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 TRIM72Q6ZMU5 477 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 FAM83AQ86UY5 434 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 ARFGAP1Q8N6T3 406 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 C10orf82Q8WW14 230 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 JDP2Q8WYK2 163 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 CPXM1Q96SM3 734 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 C17orf75Q9HAS0 396 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 CYP39A1Q9NYL5 469 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 PEX11AO75192 247 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 TCEA3O75764 348 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 DCTN3O75935 186 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 TBXAS1P24557 533 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 C15orf59Q2T9L4 293 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 KHDC1Q4VXA5 237 aaKnown RBP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 CIAPIN1Q6FI81 312 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL6A1-207ENST00000612273 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 MCUR1Q96AQ8 359 aa14.73□□□□□ -0.05
COL6A1-207ENST00000612273 GRAMD1AQ96CP6 724 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms