RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ATF6P18850 670 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 CYP2F1P24903 491 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 PTPN5P54829 565 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 GPC5P78333 572 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
CBWD3-208ENST00000612050 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 KRT39Q6A163 491 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 FAM171BQ6P995 826 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 SCARA5Q6ZMJ2 495 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 OSTM1Q86WC4 334 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 TMC8Q8IU68 726 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 B3GALNT2Q8NCR0 500 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 CSGALNACT1Q8TDX6 532 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 DNASE1L2Q92874 299 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
CBWD3-208ENST00000612050 TASP1Q9H6P5 420 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 METTL14Q9HCE5 456 aaKnown RBP13.15□□□□□ -0.3
CBWD3-208ENST00000612050 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
CBWD3-208ENST00000612050 MYBPHLA2RUH7 354 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
CBWD3-208ENST00000612050 AOC1P19801 751 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 BDNFP23560 247 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 CCR2P41597 374 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 GCLMP48507 274 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 MXI1P50539 228 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 CDR1P51861 262 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 DLG4P78352 724 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 CETN1Q12798 172 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 MLF2Q15773 248 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-208ENST00000612050 DDR2Q16832 855 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 TANGO2Q6ICL3 276 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-208ENST00000612050 SPATA20Q8TB22 786 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
CBWD3-208ENST00000612050 PCED1BQ96HM7 432 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 NELL2Q99435 816 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 XYLT2Q9H1B5 865 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 TBC1D17Q9HA65 648 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 OBP2AQ9NY56 170 aa13.14□□□□□ -0.31
CBWD3-208ENST00000612050 ARMCX3Q9UH62 379 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-208ENST00000612050 SLC38A8A6NNN8 435 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 TRIM49P0CI25 452 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 TRIM49CP0CI26 452 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CCNE1P24864 410 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 LMO2P25791 158 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 GDI1P31150 447 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 PPP3CCP48454 512 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ZCWPW2Q504Y3 356 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 SLC44A4Q53GD3 710 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 UNC93AQ86WB7 457 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ARID3BQ8IVW6 561 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ADSSL1Q8N142 457 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CELF5Q8N6W0 485 aaKnown RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 PLEKHO2Q8TD55 490 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CEP63Q96MT8 703 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 LRRC3Q9BY71 257 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 KIF9Q9HAQ2 790 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CYP3A43Q9HB55 503 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 NUP210Q8TEM1 1887 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ATP2C2O75185 946 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 NOL4O94818 638 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 GNA14O95837 355 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ASS1P00966 412 aaKnown RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 PDGFBP01127 241 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 NLRP12P59046 1061 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CYP4F8P98187 520 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 GRM2Q14416 872 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms