RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 FAM49BQ9NUQ9 324 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 TMEM161AQ9NX61 479 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 HCSTQ9UBK5 93 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 LRFN2Q9ULH4 789 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 PCDHB7Q9Y5E2 793 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 TIMM13Q9Y5L4 95 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-213ENST00000611963 KIAA1671Q9BY89 1806 aa8.59□□□□□ -1.03
TARDBP-213ENST00000611963 EYSQ5T1H1 3165 aa8.59□□□□□ -1.04
TARDBP-213ENST00000611963 NLRC5Q86WI3 1866 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 A0A0A6YYK5 440 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CTAGE9A4FU28 777 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TBKBP1A7MCY6 615 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 A8MXQ7 604 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 M0QYV0 167 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 O00370 1275 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ENC1O14682 589 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 MED7O43513 233 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 NCK2O43639 380 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 URI1O94763 535 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 B3GAT3O94766 335 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 DDHD2O94830 711 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 KIF4AO95239 1232 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 PARNO95453 639 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 FTCDO95954 541 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TUBB4AP04350 444 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ATP1A1P05023 1023 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ITGB1P05556 798 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 WARSP23381 471 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ACAT1P24752 427 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 LMO2P25791 158 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 RPL9P32969 192 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 GNL1P36915 607 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 NSFP46459 744 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CDR1P51861 262 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 PSMC1P62191 440 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 GPC5P78333 572 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CENPCQ03188 943 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 RNASELQ05823 741 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 DSC1Q08554 894 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CCDC142Q17RM4 750 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 GOLGA7BQ2TAP0 167 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TIGD5Q53EQ6 642 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 SGO2Q562F6 1265 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CNKSR3Q6P9H4 555 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 DSTYKQ6XUX3 929 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.58□□□□□ -1.048e-12■■■■■ 35.2
TARDBP-213ENST00000611963 MMS22LQ6ZRQ5 1243 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 MON1BQ7L1V2 547 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 MCOLN2Q8IZK6 566 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TTC39CQ8N584 583 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 WDTC1Q8N5D0 677 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 RNF10Q8N5U6 811 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TOP6BLQ8N6T0 577 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TRIM58Q8NG06 486 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 SLC35G2Q8TBE7 412 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CASD1Q96PB1 797 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ALS2CR12Q96Q35 445 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 NUP85Q9BW27 656 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ELAC1Q9H777 363 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 TBC1D13Q9NVG8 400 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 ADAM22Q9P0K1 906 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CTTNBP2NLQ9P2B4 639 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CNOT8Q9UFF9 292 aaKnown RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 CYTH4Q9UIA0 394 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
TARDBP-213ENST00000611963 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 PRG3Q9Y2Y8 225 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-213ENST00000611963 COL4A6Q14031 1691 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 TMEM265A0A087WTH1 108 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 TMEM110-MUSTN1A8MSY1 372 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 BUB1BO60566 1050 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 ATP2C2O75185 946 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 UPP2O95045 317 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 GJB6O95452 261 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 LSM8O95777 96 aaKnown RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CYP1A2P05177 515 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PFKMP08237 780 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CCDC130P13994 396 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 RRM1P23921 792 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 ADORA2BP29275 332 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 RFC2P35250 354 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 OR1G1P47890 313 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 AARSP49588 968 aaKnown RBP eCLIP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 DNA2P51530 1060 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PTP4A2Q12974 167 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CNGA2Q16280 664 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PTPN20Q4JDL3 420 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CYP4A22Q5TCH4 519 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 UNC93AQ86WB7 457 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PHF13Q86YI8 300 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CPNE8Q86YQ8 564 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 COLGALT2Q8IYK4 626 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 ABI1Q8IZP0 508 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms