RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 NFASCO94856 1347 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 CFAP69A5D8W1 941 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 PPP1R12AO14974 1030 aaPredicted RBP13.75□□□□□ -0.21
TCF3-220ENST00000611869 LCA5LO95447 670 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 MCL1Q07820 350 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 DNAJC3Q13217 504 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 JADE1Q6IE81 842 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 ABHD15Q6UXT9 468 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 PRELID2Q8N945 189 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 PLEKHA5Q9HAU0 1116 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 ARL2BPQ9Y2Y0 163 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 PCDHA2Q9Y5H9 948 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 MYH13Q9UKX3 1938 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 DFFAO00273 331 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 HSPA4LO95757 839 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 AKAP5P24588 427 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 PTK7Q13308 1070 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 HSDL1Q3SXM5 330 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■■■□ 21.3
TCF3-220ENST00000611869 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
TCF3-220ENST00000611869 TTC4O95801 387 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 SERPINB6P35237 376 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
TCF3-220ENST00000611869 TTMPQ5BVD1 217 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 CELF3Q5SZQ8 465 aaKnown RBP13.74□□□□□ -0.21
TCF3-220ENST00000611869 DAW1Q8N136 415 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 VCPIP1Q96JH7 1222 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 NCANO14594 1321 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 HAUS5O94927 633 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 LGALS2P05162 132 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 IFI35P80217 286 aaPredicted RBP13.74□□□□□ -0.21
TCF3-220ENST00000611869 FAM131BQ86XD5 332 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 C12orf56Q8IXR9 622 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 HDAC11Q96DB2 347 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 WNK4Q96J92 1243 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 EPAS1Q99814 870 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 CNPY3Q9BT09 278 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 DNPEPQ9ULA0 475 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 GYG2O15488 501 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 B4GALT5O43286 388 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 KCNA2P16389 499 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 EEF1DP3Q658K8 133 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 FHDC1Q9C0D6 1143 aaPredicted RBP13.74□□□□□ -0.21
TCF3-220ENST00000611869 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 AJAP1Q9UKB5 411 aaPredicted RBP13.74□□□□□ -0.21
TCF3-220ENST00000611869 RIPK2O43353 540 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 TAF1BQ53T94 588 aaPredicted RBP13.74□□□□□ -0.21
TCF3-220ENST00000611869 DLK2Q6UY11 383 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 MTMR14Q8NCE2 650 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 EXT2Q93063 718 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 C10orf88Q9H8K7 445 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
TCF3-220ENST00000611869 EEF2KO00418 725 aaKnown RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 MCF2P10911 925 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 NCAM1P13591 858 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 STIP1P31948 543 aaKnown RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 GRIK1P39086 918 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 ACADSBP45954 432 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 COG7P83436 770 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 FAM129AQ9BZQ8 928 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 MARCOQ9UEW3 520 aaPredicted RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 GMNNO75496 209 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 KRT4P19013 534 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 ACO1P21399 889 aaKnown RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 CPT1AP50416 773 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 FBXO36Q8NEA4 188 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 DNAJB3Q8WWF6 145 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 COL18A1P39060 1754 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 CICQ96RK0 1608 aaPredicted RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 E2F8A0AVK6 867 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 M0QYT0 321 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 CYP1A2P05177 515 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 RPL7AP62424 266 aaKnown RBP13.73□□□□□ -0.21
TCF3-220ENST00000611869 MAMLD1Q13495 774 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 TRPM8Q7Z2W7 1104 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 AGR3Q8TD06 166 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 SMYD3Q9H7B4 428 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 KIAA1257Q9ULG3 409 aa13.73□□□□□ -0.21
TCF3-220ENST00000611869 C17orf102A2RUQ5 167 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 GRIN3BO60391 1043 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 B3GAT3O94766 335 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 NFICP08651 508 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ZSCAN5DPP0CG00 497 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms