RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 RAB3IPQ96QF0 476 aaPredicted RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 FNBP1Q96RU3 617 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 FDXACB1Q9BRP7 624 aaPredicted RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 GOLPH3Q9H4A6 298 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 RBAKQ9NYW8 714 aaPredicted RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 MSCO60682 206 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 SOX5P35711 763 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 STAT1P42224 750 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 CETN1Q12798 172 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 KBTBD12Q3ZCT8 623 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 EPC2Q52LR7 807 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 UBAP2Q5T6F2 1119 aaKnown RBP16.81■□□□□ 0.28
RTN1-209ENST00000611068 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 TMEM192Q8IY95 271 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 EIF1ADQ8N9N8 165 aaKnown RBP16.81■□□□□ 0.28
RTN1-209ENST00000611068 MGARPQ8TDB4 240 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
RTN1-209ENST00000611068 MFSD14AQ96MC6 490 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 DPH5Q9H2P9 285 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 CTTNBP2NLQ9P2B4 639 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 CHORDC1Q9UHD1 332 aaPredicted RBP16.81■□□□□ 0.28
RTN1-209ENST00000611068 PASKQ96RG2 1323 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 EXTL3O43909 919 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 GJB6O95452 261 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 SSTR3P32745 418 aaPredicted RBP16.81■□□□□ 0.28
RTN1-209ENST00000611068 MAPK6Q16659 721 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 EEF1DP3Q658K8 133 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 KRT39Q6A163 491 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 NRG4Q8WWG1 115 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 ABTB1Q969K4 478 aaPredicted RBP16.81■□□□□ 0.28
RTN1-209ENST00000611068 STK33Q9BYT3 514 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 EPB41L4BQ9H329 900 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 ZFYVE28Q9HCC9 887 aa16.81■□□□□ 0.28
RTN1-209ENST00000611068 E2F6O75461 281 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 HNRNPCP07910 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
RTN1-209ENST00000611068 CCDC166P0CW27 439 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 GARTP22102 1010 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
RTN1-209ENST00000611068 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 ZNF467Q7Z7K2 595 aaPredicted RBP16.8■□□□□ 0.28
RTN1-209ENST00000611068 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 SYN2Q92777 582 aaPredicted RBP16.8■□□□□ 0.28
RTN1-209ENST00000611068 HAPLN3Q96S86 360 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 METTL5Q9NRN9 209 aaKnown RBP16.8■□□□□ 0.28
RTN1-209ENST00000611068 CTNNAL1Q9UBT7 734 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 ADGRA2Q96PE1 1338 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 IGKV6-21A0A0C4DH24 114 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 PJA2O43164 708 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 LCA5LO95447 670 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 CAP1Q01518 475 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 MXD4Q14582 209 aaPredicted RBP16.8■□□□□ 0.28
RTN1-209ENST00000611068 CNGA2Q16280 664 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 TMEM110Q86TL2 294 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 ZBTB8OSQ8IWT0 167 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 FBXL18Q96ME1 805 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 KREMEN1Q96MU8 473 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.8■□□□□ 0.28
RTN1-209ENST00000611068 RNF19AQ9NV58 838 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 TAS2R14Q9NYV8 317 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 AMACRQ9UHK6 382 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 BARX2Q9UMQ3 279 aaPredicted RBP16.8■□□□□ 0.28
RTN1-209ENST00000611068 GABRQQ9UN88 632 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 WDR37Q9Y2I8 494 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 ARL2BPQ9Y2Y0 163 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 TMEM98Q9Y2Y6 226 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 TLL2Q9Y6L7 1015 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 SLC4A7Q9Y6M7 1214 aa16.8■□□□□ 0.28
RTN1-209ENST00000611068 A0A0B4J269 797 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 SSU72P8A0A1W2PR75 194 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 BHMG1C9JSJ3 638 aaPredicted RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 H0YCG3 227 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 GRIK4Q16099 956 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 DGKDQ16760 1214 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 KIZQ2M2Z5 673 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 TLK2Q86UE8 772 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 NLRP7Q8WX94 980 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 SCG3Q8WXD2 468 aaKnown RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 TRIM31Q9BZY9 425 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 CCDC113Q9H0I3 377 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 DENND2DQ9H6A0 471 aaPredicted RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 MLXIPLQ9NP71 852 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 INIPQ9NRY2 104 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 MAGEA13PA6NCF6 341 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.28
RTN1-209ENST00000611068 CYP26A1O43174 497 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 ALOX15P16050 662 aaPredicted RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 ABCB4P21439 1286 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 ALKBH5Q6P6C2 394 aaKnown RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 NCCRP1Q6ZVX7 275 aaPredicted RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 UHMK1Q8TAS1 419 aaKnown RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 OXCT2Q9BYC2 517 aaPredicted RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
RTN1-209ENST00000611068 IFT122Q9HBG6 1241 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 TMEM8AQ9HCN3 771 aa16.79■□□□□ 0.28
RTN1-209ENST00000611068 TRPM7Q96QT4 1865 aa16.78■□□□□ 0.28
RTN1-209ENST00000611068 A0A0J9YVX5 310 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms