RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 NELL2Q99435 816 aa13.79□□□□□ -0.2
SNX20-205ENST00000610485 MRPL45Q9BRJ2 306 aaKnown RBP13.79□□□□□ -0.2
SNX20-205ENST00000610485 SLC46A2Q9BY10 475 aa13.79□□□□□ -0.2
SNX20-205ENST00000610485 VRTNQ9H8Y1 702 aa13.79□□□□□ -0.2
SNX20-205ENST00000610485 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
SNX20-205ENST00000610485 NME7Q9Y5B8 376 aa13.79□□□□□ -0.2
SNX20-205ENST00000610485 TCHHQ07283 1943 aa13.79□□□□□ -0.2
SNX20-205ENST00000610485 SOBPA7XYQ1 873 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 MAN2B1O00754 1011 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 CHADO15335 359 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX20-205ENST00000610485 TARSP26639 723 aaKnown RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 MAGEA9P43362 315 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 MLLT6P55198 1093 aaPredicted RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 TNNC1P63316 161 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 NUCB2P80303 420 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 TRPC3Q13507 836 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 NFIL3Q16649 462 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 VSTM1Q6UX27 236 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 C1orf210Q8IVY1 113 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 ZNF687Q8N1G0 1237 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 CLDN23Q96B33 292 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
SNX20-205ENST00000610485 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 MRPS17Q9Y2R5 130 aaKnown RBP13.78□□□□□ -0.2
SNX20-205ENST00000610485 SLC38A8A6NNN8 435 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 DPYSL4O14531 572 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 MAPK13O15264 365 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 PHACTR2O75167 634 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 TADA3O75528 432 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 PDGFRBP09619 1106 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 GNL1P36915 607 aaPredicted RBP13.77□□□□□ -0.21
SNX20-205ENST00000610485 RPS9P46781 194 aaKnown RBP13.77□□□□□ -0.21
SNX20-205ENST00000610485 DLG4P78352 724 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 FZD5Q13467 585 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 BIRC3Q13489 604 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 ARHGAP29Q52LW3 1261 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 FMR1NBQ8N0W7 255 aaPredicted RBP13.77□□□□□ -0.21
SNX20-205ENST00000610485 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.21
SNX20-205ENST00000610485 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 BPIFB1Q8TDL5 484 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 MSANTD3Q96H12 275 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 CEP295NLQ96MC4 621 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 SNX25Q9H3E2 840 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 MAGEC2Q9UBF1 373 aaPredicted RBP13.77□□□□□ -0.21
SNX20-205ENST00000610485 MAGED2Q9UNF1 606 aaPredicted RBP13.77□□□□□ -0.21
SNX20-205ENST00000610485 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
SNX20-205ENST00000610485 NCAM2O15394 837 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 GFRA3O60609 400 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 VNN1O95497 513 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 BDNFP23560 247 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 CYP27A1Q02318 531 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 NCOA4Q13772 614 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 ZACNQ401N2 412 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 ZCWPW2Q504Y3 356 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 C1orf220Q5T0J3 134 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 CEP135Q66GS9 1140 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 SCN4BQ8IWT1 228 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 MAML2Q8IZL2 1156 aaPredicted RBP13.76□□□□□ -0.21
SNX20-205ENST00000610485 CELF5Q8N6W0 485 aaKnown RBP13.76□□□□□ -0.21
SNX20-205ENST00000610485 OR6B3Q8NGW1 331 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 CSGALNACT1Q8TDX6 532 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 MRPS31Q92665 395 aaKnown RBP13.76□□□□□ -0.21
SNX20-205ENST00000610485 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 SPATA17Q96L03 361 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
SNX20-205ENST00000610485 NXF1Q9UBU9 619 aaKnown RBP13.76□□□□□ -0.21
SNX20-205ENST00000610485 FRMD4BQ9Y2L6 1034 aa13.76□□□□□ -0.21
SNX20-205ENST00000610485 PRR23AA6NEV1 266 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 A8MXQ7 604 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 IKBKBO14920 756 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 AKAP3O75969 853 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 SP9P0CG40 484 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
SNX20-205ENST00000610485 NR2F2P24468 414 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 AVPR1AP37288 418 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 ENPEPQ07075 957 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
SNX20-205ENST00000610485 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 MDH1BQ5I0G3 518 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 TXNDC8Q6A555 127 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 C1orf228Q6PIY5 440 aa13.75□□□□□ -0.21
SNX20-205ENST00000610485 ASCL5Q7RTU5 278 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms