RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 ASTLQ6HA08 431 aaPredicted RBP14.29□□□□□ -0.12
SENP3-209ENST00000610454 TANGO2Q6ICL3 276 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 FAM171BQ6P995 826 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 VSTM1Q6UX27 236 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 YAF2Q8IY57 180 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 ADSSL1Q8N142 457 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 MYCBPAPQ8TBZ2 947 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 DHTKD1Q96HY7 919 aaPredicted RBP14.29□□□□□ -0.12
SENP3-209ENST00000610454 SHDQ96IW2 340 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 PKMYT1Q99640 499 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 LRRC3Q9BY71 257 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 BRD9Q9H8M2 597 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 TMEM8AQ9HCN3 771 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 CRTAC1Q9NQ79 661 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 ZMYM5Q9UJ78 669 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 ARIH1Q9Y4X5 557 aaPredicted RBP14.29□□□□□ -0.12
SENP3-209ENST00000610454 KMT2EQ8IZD2 1858 aa14.29□□□□□ -0.12
SENP3-209ENST00000610454 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 TRIM66O15016 1216 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 MOSPD3O75425 235 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
SENP3-209ENST00000610454 BDNFP23560 247 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 CCNE1P24864 410 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 AVPR2P30518 371 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 GTF2H1P32780 548 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 RAP1GAPP47736 663 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 GPR15P49685 360 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 MXI1P50539 228 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 CLCN5P51795 746 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 VCPP55072 806 aaKnown RBP14.28□□□□□ -0.12
SENP3-209ENST00000610454 CCDC142Q17RM4 750 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 SDHAF4Q5VUM1 108 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 KRT39Q6A163 491 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 ANKRD40Q6AI12 368 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 KLHL10Q6JEL2 608 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 GAREM2Q75VX8 874 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 NUP210Q8TEM1 1887 aaPredicted RBP14.28□□□□□ -0.12
SENP3-209ENST00000610454 DEPDC1BQ8WUY9 529 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 MRPS31Q92665 395 aaKnown RBP14.28□□□□□ -0.12
SENP3-209ENST00000610454 PCED1BQ96HM7 432 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 ZSWIM3Q96MP5 696 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 TRMT61BQ9BVS5 477 aaKnown RBP14.28□□□□□ -0.12
SENP3-209ENST00000610454 ELOVL4Q9GZR5 314 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 EHD2Q9NZN4 543 aa14.28□□□□□ -0.12
SENP3-209ENST00000610454 ZNF638Q14966 1978 aaKnown RBP14.27□□□□□ -0.12
SENP3-209ENST00000610454 TRIM49BA6NDI0 452 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 SLC38A8A6NNN8 435 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 BIN1O00499 593 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 ASS1P00966 412 aaKnown RBP14.27□□□□□ -0.13
SENP3-209ENST00000610454 PSMC3P17980 439 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 FCARP24071 287 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 DDX6P26196 483 aaKnown RBP eCLIP14.27□□□□□ -0.132e-6■■■■■ 35.4
SENP3-209ENST00000610454 AVPR1AP37288 418 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 CDH8P55286 799 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
SENP3-209ENST00000610454 CYP4F8P98187 520 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 PPP3CAQ08209 521 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 GRM2Q14416 872 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 C1orf220Q5T0J3 134 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 ARID3BQ8IVW6 561 aaPredicted RBP14.27□□□□□ -0.13
SENP3-209ENST00000610454 STKLD1Q8NE28 680 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 IRF7Q92985 503 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 CEP295NLQ96MC4 621 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 MED10Q9BTT4 135 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 TASP1Q9H6P5 420 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 TBC1D17Q9HA65 648 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 TRPV4Q9HBA0 871 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.27□□□□□ -0.13
SENP3-209ENST00000610454 ARMCX3Q9UH62 379 aaPredicted RBP14.27□□□□□ -0.13
SENP3-209ENST00000610454 WDFY4Q6ZS81 3184 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 PTPRDP23468 1912 aa14.27□□□□□ -0.13
SENP3-209ENST00000610454 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 DENND4CQ5VZ89 1909 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 KRBA1A5PL33 1030 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 HEPACAM2A8MVW5 462 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 NRG2O14511 850 aaPredicted RBP14.26□□□□□ -0.13
SENP3-209ENST00000610454 ZNF263O14978 683 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 NOL4O94818 638 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
SENP3-209ENST00000610454 GDI1P31150 447 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 VIPR2P41587 438 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 NUBP1P53384 320 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 NLRP12P59046 1061 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 PRKCQQ04759 706 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 MLF2Q15773 248 aaPredicted RBP14.26□□□□□ -0.13
SENP3-209ENST00000610454 CAMK4Q16566 473 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 WDR44Q5JSH3 913 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 SPOPLQ6IQ16 392 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 VITQ6UXI7 678 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 FBXL13Q8NEE6 735 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 TAS1R2Q8TE23 839 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
SENP3-209ENST00000610454 ELMO3Q96BJ8 720 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms