RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 STAT4Q14765 748 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 C6orf52Q5T4I8 152 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 PCNX4Q63HM2 1172 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 NIPAL1Q6NVV3 410 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 TRIM59Q8IWR1 403 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 AASDHPPTQ9NRN7 309 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 ANAPC5Q9UJX4 755 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 SMG5Q9UPR3 1016 aaKnown RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 AP4B1Q9Y6B7 739 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 TPPPO94811 219 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 POLR2MP0CAP2 368 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 ZNF12P17014 697 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 NR4A1P22736 598 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 ADCY8P40145 1251 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 CDK9P50750 372 aaKnown RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 HIC1Q14526 733 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 ADGRG6Q86SQ4 1221 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 ATG4AQ8WYN0 398 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 HPS1Q92902 700 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 BTBD9Q96Q07 612 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 MAK16Q9BXY0 300 aaKnown RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
CTCFL-218ENST00000608440 TAS2R14Q9NYV8 317 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
CTCFL-218ENST00000608440 COL4A1P02462 1669 aa13.15□□□□□ -0.31
CTCFL-218ENST00000608440 SNAP23O00161 211 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 PFDN6O15212 129 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 AQP9O43315 295 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 ENO2P09104 434 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-218ENST00000608440 GCAP28676 217 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 HSD17B4P51659 736 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 NFIXQ14938 502 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 PUS10Q3MIT2 529 aaKnown RBP13.14□□□□□ -0.31
CTCFL-218ENST00000608440 AAGABQ6PD74 315 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 CPNE8Q86YQ8 564 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 VGLL2Q8N8G2 317 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 EME1Q96AY2 570 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-218ENST00000608440 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 FAM58BPP0C7Q3 252 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 PLS3P13797 630 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 XIAPP98170 497 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 WASHC5Q12768 1159 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 CCNIQ14094 377 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 UBE3CQ15386 1083 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 SEC23AQ15436 765 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 WDR45BQ5MNZ6 344 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 CCSAPQ6IQ19 270 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-218ENST00000608440 DHRS4L2Q6PKH6 230 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 PRPF39Q86UA1 669 aaKnown RBP13.14□□□□□ -0.31
CTCFL-218ENST00000608440 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 ALLCQ8N6M5 410 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTCFL-218ENST00000608440 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 SLC39A3Q9BRY0 314 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 FGFBP2Q9BYJ0 223 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 Q9H521 79 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 WHRNQ9P202 907 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 LAMB2P55268 1798 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
CTCFL-218ENST00000608440 A0A088AWK7 358 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 TEX28O15482 410 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 PEX1O43933 1283 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 CHEK2O96017 543 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 HSPA6P17066 643 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 ADRA2BP18089 450 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 ITIH2P19823 946 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 APOFQ13790 326 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 MESDQ14696 234 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 RALGPS1Q5JS13 557 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
CTCFL-218ENST00000608440 SNF8Q96H20 258 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 CCDC68Q9H2F9 335 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 MAGEF1Q9HAY2 307 aa13.13□□□□□ -0.31
CTCFL-218ENST00000608440 PLK2Q9NYY3 685 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms