RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	CAMKK1	Q8N5S9	505 aa		22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	MRPS31	Q92665	395 aa	Known RBP	22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	EZH1	Q92800	747 aa	Predicted RBP	22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	RXFP3	Q9NSD7	469 aa		22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	POLR3B	Q9NW08	1133 aa	Predicted RBP	22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	GDAP2	Q9NXN4	497 aa		22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	STK17A	Q9UEE5	414 aa		22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	PCNX2	A6NKB5	2137 aa		22.61	■■□□□ 1.21
NECAB3-222	ENST00000607805	MYMK	A6NI61	221 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	RNF40	O75150	1001 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	DRD1	P21728	446 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	CYP2F1	P24903	491 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	GJA4	P35212	333 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	PDGFRL	Q15198	375 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	DDR2	Q16832	855 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	INTS6L	Q5JSJ4	861 aa	Known RBP	22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	L1TD1	Q5T7N2	865 aa	Known RBP	22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	OSTM1	Q86WC4	334 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	TMEM86A	Q8N2M4	240 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	LRRC52	Q8N7C0	313 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	SPATA18	Q8TC71	538 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	FAM84A	Q96KN4	292 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	SLC22A12	Q96S37	553 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	FAM213A	Q9BRX8	229 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	DDX43	Q9NXZ2	648 aa	Known RBP	22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	UXT	Q9UBK9	157 aa	Predicted RBP	22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	AGAP1	Q9UPQ3	857 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	SLC8A2	Q9UPR5	921 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	PLXND1	Q9Y4D7	1925 aa		22.6	■■□□□ 1.21
NECAB3-222	ENST00000607805	IGF2R	P11717	2491 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	TNRC6B	Q9UPQ9	1833 aa	Known RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	FAM208B	Q5VWN6	2430 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	CEP192	Q8TEP8	1941 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	GABRD	O14764	452 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	ITGB3	P05106	788 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	GAP43	P17677	238 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	CASP5	P51878	434 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	TFAM	Q00059	246 aa	Known RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	ZNF77	Q15935	545 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	CCDC142	Q17RM4	750 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	CFAP221	Q4G0U5	840 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	LIMS2	Q7Z4I7	341 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	DDX1	Q92499	740 aa	Known RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	ACCS	Q96QU6	501 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	MRPL44	Q9H9J2	332 aa	Known RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	OLFML3	Q9NRN5	406 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	SIX4	Q9UIU6	781 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	FBXO2	Q9UK22	296 aa	Predicted RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	MAGED2	Q9UNF1	606 aa	Predicted RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	CLIC4	Q9Y696	253 aa		22.59	■■□□□ 1.21
NECAB3-222	ENST00000607805	FRMD3	A2A2Y4	597 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	HUS1	O60921	280 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	GART	P22102	1010 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	ACAT1	P24752	427 aa	Known RBP	22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	RPL10A	P62906	217 aa	Known RBP	22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	AMPD2	Q01433	879 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	FAM160A1	Q05DH4	1040 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	USP4	Q13107	963 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	MTF1	Q14872	753 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	CCDC6	Q16204	474 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	SAAL1	Q96ER3	474 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	CYP2S1	Q96SQ9	504 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	P2RY13	Q9BPV8	354 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	FGFBP2	Q9BYJ0	223 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	TMEM206	Q9H813	350 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	ECT2	Q9H8V3	914 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	GCNT4	Q9P109	453 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	GTF3C4	Q9UKN8	822 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	ITGA11	Q9UKX5	1188 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	EXOC7	Q9UPT5	735 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	PCDHGA5	Q9Y5G8	931 aa		22.58	■■□□□ 1.21
NECAB3-222	ENST00000607805	WDFY3	Q8IZQ1	3526 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	LDHA	P00338	332 aa	Known RBP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	TCF3	P15923	654 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	PLK5	Q496M5	336 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	FBXO43	Q4G163	708 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	AASDH	Q4L235	1098 aa	Predicted RBP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	CC2D1A	Q6P1N0	951 aa	Predicted RBP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	FAM171B	Q6P995	826 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	TOP6BL	Q8N6T0	577 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	CACTIN	Q8WUQ7	758 aa	Known RBP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	OSCP1	Q8WVF1	389 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	FUBP3	Q96I24	572 aa	Known RBP eCLIP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	RBAK	Q9NYW8	714 aa	Predicted RBP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	TBC1D7	Q9P0N9	293 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	SRPRB	Q9Y5M8	271 aa	Known RBP	22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	AKAP13	Q12802	2813 aa		22.57	■■□□□ 1.2
NECAB3-222	ENST00000607805	MYH10	P35580	1976 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	HCRT	O43612	131 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	MYL7	Q01449	175 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	SOWAHA	Q2M3V2	549 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	EML3	Q32P44	896 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	SYT13	Q7L8C5	426 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	CBWD1	Q9BRT8	395 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	DUSP15	Q9H1R2	295 aa	Predicted RBP	22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	EBF1	Q9UH73	591 aa		22.56	■■□□□ 1.2
NECAB3-222	ENST00000607805	USP17L7	P0C7H9	530 aa		22.55	■■□□□ 1.2
NECAB3-222	ENST00000607805	CCDC192	P0DO97	292 aa		22.55	■■□□□ 1.2
NECAB3-222	ENST00000607805	PML	P29590	882 aa		22.55	■■□□□ 1.2

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms