RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 FOXD4Q12950 439 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 NR1H3Q13133 447 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 RABGAP1LQ5R372 815 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 HYIQ5T013 277 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 NBPF12Q5TAG4 269 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 SNX30Q5VWJ9 437 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 SNX31Q8N9S9 440 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 TMEM161BQ8NDZ6 487 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 LMO3Q8TAP4 145 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 TEKT4Q8WW24 435 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 SHC3Q92529 594 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 PTPRN2Q92932 1015 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 SGF29Q96ES7 293 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 FAM163AQ96GL9 167 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 FIZ1Q96SL8 496 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 TMEM120AQ9BXJ8 343 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 TRIM4Q9C037 500 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 FAM49AQ9H0Q0 323 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 MANSC1Q9H8J5 431 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 PICK1Q9NRD5 415 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 UBP1Q9NZI7 540 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 UVRAGQ9P2Y5 699 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 CFAP73A6NFT4 308 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 NVLO15381 856 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 PEX1O43933 1283 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 PROSCO94903 275 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ZBED1O96006 694 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 FDX1P10109 184 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 CLCN3P51790 818 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ARL4CP56559 192 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 SLC25A3Q00325 362 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 MAMLD1Q13495 774 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 CUL2Q13617 745 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 UBAP2LQ14157 1087 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 STRIP1Q5VSL9 837 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 AP1ARQ63HQ0 302 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 TSHZ1Q6ZSZ6 1077 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 NUDCD3Q8IVD9 361 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 NDUFAF2Q8N183 169 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 LRRC43Q8N309 656 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 GALNT4Q8N4A0 578 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ZNF513Q8N8E2 541 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ADAM32Q8TC27 787 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 NDRG1Q92597 394 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 RUBCNQ92622 972 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ATP6V0A1Q93050 837 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ERLEC1Q96DZ1 483 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 FAM81BQ96LP2 452 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ADPGKQ9BRR6 497 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 DHX35Q9H5Z1 703 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 YY1AP1Q9H869 796 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 APOBEC3GQ9HC16 384 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 AGO4Q9HCK5 861 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 PCYOX1Q9UHG3 505 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 YDJCA8MPS7 323 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 CREB3O43889 395 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 CIB2O75838 187 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 UNC5CO95185 931 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ASNSP08243 561 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ADORA2BP29275 332 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 CAP2P40123 477 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 AQP5P55064 265 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ACTR2P61160 394 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 OLIG2Q13516 323 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ITIH4Q14624 930 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 STAT4Q14765 748 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ZNF568Q3ZCX4 644 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 COBLL1Q53SF7 1204 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 VWA5B1Q5TIE3 1220 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 DPY19L2P1Q6NXN4 242 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 GADL1Q6ZQY3 521 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 PRPF39Q86UA1 669 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 RNF169Q8NCN4 708 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 ABTB1Q969K4 478 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 BORCS6Q96GS4 357 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 MARK4Q96L34 752 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 MAGEB18Q96M61 343 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 PDCD2LQ9BRP1 358 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 C17orf75Q9HAS0 396 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 ANLNQ9NQW6 1124 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 TSR3Q9UJK0 312 aaKnown RBP6.78□□□□□ -1.32
RPF2-204ENST00000607388 GRID1Q9ULK0 1009 aa6.78□□□□□ -1.32
RPF2-204ENST00000607388 GTPBP10A4D1E9 387 aaKnown RBP6.77□□□□□ -1.32
RPF2-204ENST00000607388 B4GALT5O43286 388 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 ATP9BO43861 1147 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 GM2AP17900 193 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 GLRA2P23416 452 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 PHBP35232 272 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 GNL1P36915 607 aaPredicted RBP6.77□□□□□ -1.32
RPF2-204ENST00000607388 GLRBP48167 497 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 ATXN1P54253 815 aaKnown RBP6.77□□□□□ -1.32
RPF2-204ENST00000607388 EMC2Q15006 297 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 PCGF5Q86SE9 256 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 NIM1KQ8IY84 436 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 TMEM35BQ8NCS4 154 aa6.77□□□□□ -1.32
RPF2-204ENST00000607388 MCUQ8NE86 351 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms