RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 TADA3O75528 432 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 BCKDHBP21953 392 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 ABCD1P33897 745 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 IFNAR2P48551 515 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 ZNF131P52739 623 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 RPL10AP62906 217 aaKnown RBP16.14■□□□□ 0.17
SSBP4-214ENST00000607020 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
SSBP4-214ENST00000607020 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 KIAA1958Q8N8K9 716 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 DEFB124Q8NES8 71 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 ZCCHC14Q8WYQ9 949 aaKnown RBP16.14■□□□□ 0.17
SSBP4-214ENST00000607020 SLC32A1Q9H598 525 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 UPF2Q9HAU5 1272 aaKnown RBP16.14■□□□□ 0.17
SSBP4-214ENST00000607020 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.14■□□□□ 0.17
SSBP4-214ENST00000607020 TMLHEQ9NVH6 421 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 DPP3Q9NY33 737 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 MMP17Q9ULZ9 603 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 STYXL1Q9Y6J8 313 aa16.14■□□□□ 0.17
SSBP4-214ENST00000607020 NPHP3-ACAD11A0A0J9YXS1 232 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 KPNA7A9QM74 516 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
SSBP4-214ENST00000607020 DPP6P42658 865 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 CDR1P51861 262 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 PSMD2Q13200 908 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 CRY1Q16526 586 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 PIP4P1Q86T03 277 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 PIGKQ92643 395 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 CYP2S1Q96SQ9 504 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 ACBD6Q9BR61 282 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 MAGED2Q9UNF1 606 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-214ENST00000607020 LHX6Q9UPM6 363 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 WNT6Q9Y6F9 365 aa16.13■□□□□ 0.17
SSBP4-214ENST00000607020 PDCD11Q14690 1871 aaKnown RBP16.13■□□□□ 0.17
SSBP4-214ENST00000607020 NUP210Q8TEM1 1887 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-214ENST00000607020 TRAV19A0A0A6YYK7 116 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 SLC26A4O43511 780 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 OPRD1P41143 372 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 P2RY2P41231 377 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 PNPLA4P41247 253 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 DHPSP49366 369 aaPredicted RBP16.12■□□□□ 0.17
SSBP4-214ENST00000607020 GPR15P49685 360 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 MRPS21P82921 87 aaKnown RBP16.12■□□□□ 0.17
SSBP4-214ENST00000607020 GTF2BQ00403 316 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 TSPY1Q01534 308 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 HSF5Q4G112 596 aaPredicted RBP16.12■□□□□ 0.17
SSBP4-214ENST00000607020 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 SLFN12LQ6IEE8 588 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 SYT12Q8IV01 421 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 EFCAB13Q8IY85 973 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 MDGA1Q8NFP4 955 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 SLC22A12Q96S37 553 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 FIZ1Q96SL8 496 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 PI4K2AQ9BTU6 479 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 NUSAP1Q9BXS6 441 aaKnown RBP16.12■□□□□ 0.17
SSBP4-214ENST00000607020 TPSD1Q9BZJ3 242 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 LINC00597Q9H2U6 94 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 ARHGAP26Q9UNA1 814 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 CITO14578 2027 aa16.12■□□□□ 0.17
SSBP4-214ENST00000607020 A0A0A0MRY4 1105 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 H0Y626 953 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 TAF4O00268 1085 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 HYAL3O43820 417 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-214ENST00000607020 ALDH1A2O94788 518 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 TRIM16O95361 564 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 NFATC1O95644 943 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 CAPNS1P04632 268 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 CHRM1P11229 460 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-214ENST00000607020 PFKLP17858 780 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 HOXD12P35452 270 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 ACOT2P49753 483 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-214ENST00000607020 SEMA3BQ13214 749 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
SSBP4-214ENST00000607020 DDR2Q16832 855 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 GAB4Q2WGN9 574 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 UAP1L1Q3KQV9 507 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 SV2CQ496J9 727 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 TRIM61Q5EBN2 209 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 SDHAF4Q5VUM1 108 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 ANO7Q6IWH7 933 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 SLC23A3Q6PIS1 610 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 LPCAT2Q7L5N7 544 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 NT5DC4Q86YG4 428 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 CCDC83Q8IWF9 413 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 SPATA18Q8TC71 538 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 SH3RF2Q8TEC5 729 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 PKMYT1Q99640 499 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 REEP2Q9BRK0 252 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 KIF26AQ9ULI4 1882 aaPredicted RBP16.11■□□□□ 0.17
SSBP4-214ENST00000607020 DMXL2Q8TDJ6 3036 aa16.11■□□□□ 0.17
SSBP4-214ENST00000607020 TRAK2O60296 914 aa16.1■□□□□ 0.17
SSBP4-214ENST00000607020 CKMP06732 381 aa16.1■□□□□ 0.17
SSBP4-214ENST00000607020 CYP2F1P24903 491 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms