RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CLCN4P51793 760 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 CACNA2D1P54289 1103 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 RBM10P98175 930 aaKnown RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 GPR17Q13304 367 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 RAB33AQ14088 237 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 ARID5BQ14865 1188 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 ASIC2Q16515 512 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 PTPROQ16827 1216 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 GOLGA7BQ2TAP0 167 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 PPP1R26Q5T8A7 1209 aaPredicted RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 SFMBT2Q5VUG0 894 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 TAF3Q5VWG9 929 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 PDE12Q6L8Q7 609 aaKnown RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 FAM171BQ6P995 826 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 PAQR9Q6ZVX9 377 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 IRF2BP2Q7Z5L9 587 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 PASD1Q8IV76 773 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 DCP1BQ8IZD4 617 aaKnown RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 UNC80Q8N2C7 3258 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 TC2NQ8N9U0 490 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 ATAD1Q8NBU5 361 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 CYFIP2Q96F07 1278 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 DNAJC7Q99615 494 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 MED10Q9BTT4 135 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 OXCT2Q9BYC2 517 aaPredicted RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 ZNF518BQ9C0D4 1074 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 TMEM30AQ9NV96 361 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 TSPAN16Q9UKR8 245 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 MYO6Q9UM54 1294 aa8.16□□□□□ -1.1
MSH6-211ENST00000606499 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.16□□□□□ -1.1
MSH6-211ENST00000606499 MTCL1Q9Y4B5 1905 aaKnown RBP8.16□□□□□ -1.1
MSH6-211ENST00000606499 GREB1Q4ZG55 1949 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 SPTBN5Q9NRC6 3674 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 M0QYV0 167 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 TGM5O43548 720 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 CLASP2O75122 1294 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 ABLIM3O94929 683 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 SEC24AO95486 1093 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 GLUD1P00367 558 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 MMEP08473 750 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 PLEKP08567 350 aaPredicted RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 SKILP12757 684 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 EPCAMP16422 314 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 CHRNB2P17787 502 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 IGFBP4P22692 258 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 BDNFP23560 247 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 CYP2F1P24903 491 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 PTK2Q05397 1052 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 ADCY1Q08828 1119 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 HYAL1Q12794 435 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 DUSP4Q13115 394 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 MAPRE1Q15691 268 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 NFE2Q16621 373 aaPredicted RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 DUSP6Q16828 381 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 CFAP221Q4G0U5 840 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 TDRD12Q587J7 1177 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 TCEAL5Q5H9L2 206 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 TPGS2Q68CL5 300 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 HGSNATQ68CP4 663 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 ARHGAP17Q68EM7 881 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 DENND1BQ6P3S1 775 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 LILRA6Q6PI73 481 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 WDR59Q6PJI9 974 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 C4orf50Q6ZRC1 276 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 TTC30AQ86WT1 665 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 SPATA2LQ8IUW3 424 aaPredicted RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 CNGA4Q8IV77 575 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 MICALL1Q8N3F8 863 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 DEFB123Q8N688 67 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 STKLD1Q8NE28 680 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 VN1R2Q8NFZ6 395 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 ZNF461Q8TAF7 563 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 OLIG1Q8TAK6 271 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 ZNF606Q8WXB4 792 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 MYLIPQ8WY64 445 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 DDX1Q92499 740 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 SEPT5Q99719 369 aaPredicted RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 DNAI2Q9GZS0 605 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 TLE6Q9H808 572 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 KRT82Q9NSB4 513 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 AIPL1Q9NZN9 384 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 IMPACTQ9P2X3 320 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 AFF4Q9UHB7 1163 aaKnown RBP8.15□□□□□ -1.1
MSH6-211ENST00000606499 KIAA1257Q9ULG3 409 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 PCDHB5Q9Y5E4 795 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 HCFC2Q9Y5Z7 792 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 MTCH2Q9Y6C9 303 aa8.15□□□□□ -1.1
MSH6-211ENST00000606499 OBSL1O75147 1896 aa8.15□□□□□ -1.11
MSH6-211ENST00000606499 ATP8B3O60423 1300 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 C2orf16Q68DN1 1984 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 TULP2O00295 520 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 PRRG1O14668 218 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 LINC01565O15544 149 aa8.14□□□□□ -1.11
MSH6-211ENST00000606499 AP1G2O75843 785 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms