RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 SEMA4GQ9NTN9 838 aa19.54■□□□□ 0.72
CCDC12-213ENST00000605875 HSPBP1Q9NZL4 362 aa19.54■□□□□ 0.72
CCDC12-213ENST00000605875 PTPRJQ12913 1337 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 SPTBN2O15020 2390 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.53■□□□□ 0.72
CCDC12-213ENST00000605875 A0A1B0GVL5 298 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 HAPLN1P10915 354 aaPredicted RBP19.53■□□□□ 0.72
CCDC12-213ENST00000605875 SMARCB1Q12824 385 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 CCINQ13939 588 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 ITPRIPL2Q3MIP1 535 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 WSCD1Q658N2 575 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 CEP68Q76N32 757 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 LRRTM3Q86VH5 581 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 SPPL2BQ8TCT7 592 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 SCFD1Q8WVM8 642 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 AGPAT3Q9NRZ7 376 aa19.53■□□□□ 0.72
CCDC12-213ENST00000605875 ZNF638Q14966 1978 aaKnown RBP19.52■□□□□ 0.72
CCDC12-213ENST00000605875 SLC30A4O14863 429 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 KIAA0391O15091 583 aaKnown RBP19.52■□□□□ 0.72
CCDC12-213ENST00000605875 TMEM191BP0C7N4 346 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 SLFN14P0C7P3 912 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 BFSP1Q12934 665 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 CSRP2Q16527 193 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 SCARA3Q6AZY7 606 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 WDR5BQ86VZ2 330 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 DCP1BQ8IZD4 617 aaKnown RBP19.52■□□□□ 0.72
CCDC12-213ENST00000605875 CMTM8Q8IZV2 173 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 ZNF507Q8TCN5 953 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 SLC39A2Q9NP94 309 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 GKN1Q9NS71 199 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 ABI2Q9NYB9 513 aaPredicted RBP19.52■□□□□ 0.72
CCDC12-213ENST00000605875 ZMYM5Q9UJ78 669 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 ITGA11Q9UKX5 1188 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 AGAP1Q9UPQ3 857 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 DENND4CQ5VZ89 1909 aa19.52■□□□□ 0.72
CCDC12-213ENST00000605875 KPNA7A9QM74 516 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 TGFB1I1O43294 461 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 KRT19P08727 400 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 HOXA6P31267 233 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 HOXC13P31276 330 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 PNPLA4P41247 253 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 CYP2J2P51589 502 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 FAM160A2Q8N612 972 aaPredicted RBP19.51■□□□□ 0.71
CCDC12-213ENST00000605875 MAB21L3Q8N8X9 362 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 CACTINQ8WUQ7 758 aaKnown RBP19.51■□□□□ 0.71
CCDC12-213ENST00000605875 SIX4Q9UIU6 781 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 HPSEQ9Y251 543 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 PCDHB5Q9Y5E4 795 aa19.51■□□□□ 0.71
CCDC12-213ENST00000605875 PVALEFA0A1B0GWK0 134 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 CLIC2O15247 247 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 KLRC4O43908 158 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 CMA1P23946 247 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 AVPR1AP37288 418 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 BMT2Q1RMZ1 405 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 TMEM150AQ86TG1 271 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 OR5B17Q8NGF7 314 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 CXorf38Q8TB03 319 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 PAGE5Q96GU1 130 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 ANKRD36BP1Q96IX9 119 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 EXOC1Q9NV70 894 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 ATP6V1DQ9Y5K8 247 aa19.5■□□□□ 0.71
CCDC12-213ENST00000605875 ZNF233A6NK53 670 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 GDF9O60383 454 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 F11P03951 625 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 HMGA1P17096 107 aaKnown RBP19.49■□□□□ 0.71
CCDC12-213ENST00000605875 DDX6P26196 483 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC12-213ENST00000605875 NLRP12P59046 1061 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 TSPY1Q01534 308 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 GRSF1Q12849 480 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC12-213ENST00000605875 RUNX3Q13761 415 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 BECN1Q14457 450 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 SNRNP35Q16560 246 aaKnown RBP19.49■□□□□ 0.71
CCDC12-213ENST00000605875 PPM1JQ5JR12 505 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 HS2ST1Q7LGA3 356 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 CSGALNACT2Q8N6G5 542 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 LRRC52Q8N7C0 313 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 FAM83CQ9BQN1 747 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 PI4K2AQ9BTU6 479 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 INTS13Q9NVM9 706 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 L1RE1Q9UN81 338 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 CCL26Q9Y258 94 aa19.49■□□□□ 0.71
CCDC12-213ENST00000605875 ATG2BQ96BY7 2078 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 FOXD2O60548 495 aaPredicted RBP19.48■□□□□ 0.71
CCDC12-213ENST00000605875 PRPF40AO75400 957 aaKnown RBP19.48■□□□□ 0.71
CCDC12-213ENST00000605875 TNNC2P02585 160 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 ADRB1P08588 477 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 GPR15P49685 360 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 NDUFA8P51970 172 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 TMEM196Q5HYL7 178 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 TRIM68Q6AZZ1 485 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 PKN3Q6P5Z2 889 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 PDCL2Q8N4E4 241 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 RDH13Q8NBN7 331 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 KIAA0895Q8NCT3 520 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 USP13Q92995 863 aaPredicted RBP19.48■□□□□ 0.71
CCDC12-213ENST00000605875 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 EBF3Q9H4W6 596 aa19.48■□□□□ 0.71
CCDC12-213ENST00000605875 HPS4Q9NQG7 708 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms