RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 GCNAQ96QF7 691 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 MKNK1Q9BUB5 465 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 ZFP14Q9HCL3 533 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 ZNF318Q5VUA4 2279 aa15.39■□□□□ 0.05
TUBE1-208ENST00000604743 KMT2EQ8IZD2 1858 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 ECI2O75521 394 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 FGF19O95750 216 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 FAM163BP0C2L3 166 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 P4HA1P13674 534 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
TUBE1-208ENST00000604743 BMP6P22004 513 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 RFX1P22670 979 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 GRIK1P39086 918 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 VIPR2P41587 438 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 VCPP55072 806 aaKnown RBP15.38■□□□□ 0.05
TUBE1-208ENST00000604743 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 MORC3Q14149 939 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 GRM2Q14416 872 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 CFAP221Q4G0U5 840 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 ARHGAP15Q53QZ3 475 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 GPR158Q5T848 1215 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 TAS1R2Q8TE23 839 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 NELFBQ8WX92 580 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 SMARCD2Q92925 531 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 PCED1BQ96HM7 432 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 DHTKD1Q96HY7 919 aaPredicted RBP15.38■□□□□ 0.05
TUBE1-208ENST00000604743 FUBP3Q96I24 572 aaKnown RBP eCLIP15.38■□□□□ 0.05
TUBE1-208ENST00000604743 ASB16Q96NS5 453 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 GPR88Q9GZN0 384 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 SDCBP2Q9H190 292 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 VRTNQ9H8Y1 702 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 TMEM8AQ9HCN3 771 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 ABCB6Q9NP58 842 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 CTNND2Q9UQB3 1225 aa15.38■□□□□ 0.05
TUBE1-208ENST00000604743 NUP210Q8TEM1 1887 aaPredicted RBP15.37■□□□□ 0.05
TUBE1-208ENST00000604743 SLC38A8A6NNN8 435 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 PPP1R3GB7ZBB8 358 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 LRRN2O75325 713 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
TUBE1-208ENST00000604743 CSH1P0DML2 217 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 CSH2P0DML3 217 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 FCARP24071 287 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 CDC25CP30307 473 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 MXI1P50539 228 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 STX17P56962 302 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 ORC1Q13415 861 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 KRT39Q6A163 491 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 CCDC150Q8NCX0 1101 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 MYCBPAPQ8TBZ2 947 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 TAF4BQ92750 862 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 ELSPBP1Q96BH3 223 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 MED10Q9BTT4 135 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 IL21Q9HBE4 155 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 WNT16Q9UBV4 365 aa15.37■□□□□ 0.05
TUBE1-208ENST00000604743 KRBA1A5PL33 1030 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 CLDN5O00501 218 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 SLC16A3O15427 465 aaKnown RBP15.36■□□□□ 0.05
TUBE1-208ENST00000604743 STX10O60499 249 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 HMGA1P17096 107 aaKnown RBP15.36■□□□□ 0.05
TUBE1-208ENST00000604743 ANXA13P27216 316 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 AVPR2P30518 371 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 PPP1R2P41236 205 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 MAGEA11P43364 429 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 NOP14P78316 857 aaKnown RBP15.36■□□□□ 0.05
TUBE1-208ENST00000604743 ENPEPQ07075 957 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 CCDC40Q4G0X9 1142 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 IER5LQ5T953 404 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 ARID3BQ8IVW6 561 aaPredicted RBP15.36■□□□□ 0.05
TUBE1-208ENST00000604743 B3GALNT2Q8NCR0 500 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 APOBEC3GQ9HC16 384 aaKnown RBP15.36■□□□□ 0.05
TUBE1-208ENST00000604743 SLC2A4RGQ9NR83 387 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 ANAPC1Q9H1A4 1944 aa15.36■□□□□ 0.05
TUBE1-208ENST00000604743 TICRRQ7Z2Z1 1910 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 HEPACAM2A8MVW5 462 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 DPYSL4O14531 572 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 CD58P19256 250 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 GTF2H1P32780 548 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 ASPAP45381 313 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 NDST1P52848 882 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 NLRP12P59046 1061 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 VSTM1Q6UX27 236 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 VITQ6UXI7 678 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 ACOT1Q86TX2 421 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 ZC3H3Q8IXZ2 948 aaKnown RBP15.35■□□□□ 0.05
TUBE1-208ENST00000604743 MAB21L3Q8N8X9 362 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 SEMA4DQ92854 862 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 TNIP3Q96KP6 325 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 DUSP9Q99956 384 aaKnown RBP15.35■□□□□ 0.05
TUBE1-208ENST00000604743 TRMT61BQ9BVS5 477 aaKnown RBP15.35■□□□□ 0.05
TUBE1-208ENST00000604743 B3GNT5Q9BYG0 378 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 ZNF518BQ9C0D4 1074 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 SMG9Q9H0W8 520 aaKnown RBP15.35■□□□□ 0.05
TUBE1-208ENST00000604743 TASP1Q9H6P5 420 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 BRD9Q9H8M2 597 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 ARHGEF3Q9NR81 526 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 HMGXB4Q9UGU5 601 aa15.35■□□□□ 0.05
TUBE1-208ENST00000604743 ARMCX3Q9UH62 379 aaPredicted RBP15.35■□□□□ 0.05
TUBE1-208ENST00000604743 COL4A3Q01955 1670 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms