RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 INTUQ9ULD6 942 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 GRID2IPA4D2P6 1211 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 NT5C1B-RDH14C9J2C7 533 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 TULP2O00295 520 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 DGKIO75912 1065 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 PFKMP08237 780 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 NSFP46459 744 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 PTPROQ16827 1216 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 DCLRE1AQ6PJP8 1040 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 TRIM72Q6ZMU5 477 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 MCOLN2Q8IZK6 566 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 CTNNBL1Q8WYA6 563 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 FAM193BQ96PV7 902 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 FAM124BQ9H5Z6 455 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 CRTAC1Q9NQ79 661 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 DDX43Q9NXZ2 648 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 ABHD14A-ACY1A0A1B0GW23 586 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 M0QZQ0 153 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 NRP1O14786 923 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 GJB6O95452 261 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 RRM1P23921 792 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 CDH5P33151 784 aaPredicted RBP18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 PTPN20Q4JDL3 420 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 TTC39CQ8N584 583 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 RFFLQ8WZ73 363 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 SUSD3Q96L08 255 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM209Q96SK2 561 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 VIPAS39Q9H9C1 493 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 RC3H2Q9HBD1 1191 aaKnown RBP18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 VPS18Q9P253 973 aa18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 FNDC1Q4ZHG4 1894 aaPredicted RBP18.36■□□□□ 0.53
PPFIA3-207ENST00000602716 BTNL10A8MVZ5 291 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 PDE2AO00408 941 aaPredicted RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 ODC1P11926 461 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 ADORA2BP29275 332 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 B3GALNT2Q8NCR0 500 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 SLC35G2Q8TBE7 412 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 TOP1MTQ969P6 601 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 B3GALT6Q96L58 329 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 TRIM7Q9C029 511 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM189-UBE2V1I3L0A0 370 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CLDN5O00501 218 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 HOXA2O43364 376 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 PALMO75781 387 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 LSM8O95777 96 aaKnown RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CNGA2Q16280 664 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CYP4A22Q5TCH4 519 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 LCLAT1Q6UWP7 414 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 PHF13Q86YI8 300 aaPredicted RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CPNE8Q86YQ8 564 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CRYBG2Q8N1P7 616 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 LRRC43Q8N309 656 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM35BQ8NCS4 154 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 TRIM58Q8NG06 486 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 OR10T2Q8NGX3 314 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 FAM71BQ8TC56 605 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CPXM1Q96SM3 734 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 GTF3C4Q9UKN8 822 aa18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 ZMYND8Q9ULU4 1186 aaPredicted RBP18.35■□□□□ 0.53
PPFIA3-207ENST00000602716 ZNF185O15231 689 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 MED7O43513 233 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 FTCDO95954 541 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 CYP1A2P05177 515 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 MMP8P22894 467 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 GPD2P43304 727 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 NOP2P46087 812 aaKnown RBP18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 GPC5P78333 572 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 MDH1BQ5I0G3 518 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 NOX5Q96PH1 765 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 SYT15Q9BQS2 421 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 MRPL9Q9BYD2 267 aaKnown RBP18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 GPR62Q9BZJ7 368 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 ACBD3Q9H3P7 528 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 CWH43Q9H720 699 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 CXXC1Q9P0U4 656 aaPredicted RBP18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 SNX12Q9UMY4 172 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 FAN1Q9Y2M0 1017 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 JRKLQ9Y4A0 524 aa18.34■□□□□ 0.53
PPFIA3-207ENST00000602716 A0A0A6YYK5 440 aaPredicted RBP18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 MYBPHLA2RUH7 354 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 PIK3R2O00459 728 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 NCK2O43639 380 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 CYP11A1P05108 521 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 GALTP07902 379 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 LMAN1P49257 510 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 MAP9Q49MG5 647 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 PKDCCQ504Y2 493 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 SMYD5Q6GMV2 418 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM86AQ8N2M4 240 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 LRRC57Q8N9N7 239 aa18.33■□□□□ 0.53
PPFIA3-207ENST00000602716 TPCN2Q8NHX9 752 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms