RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	SYAP1	Q96A49	352 aa	Predicted RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	MRPL45	Q9BRJ2	306 aa	Known RBP	13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	TASP1	Q9H6P5	420 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	BRD9	Q9H8M2	597 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	CRTAC1	Q9NQ79	661 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	HEBP1	Q9NRV9	189 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	FAM86C1	Q9NVL1	165 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	ZMYM5	Q9UJ78	669 aa		13.27	□□□□□ -0.29
STRN4-223	ENST00000602223	SHISA7	A6NL88	538 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	ARNTL	O00327	626 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	MAPK13	O15264	365 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	PHACTR2	O75167	634 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	NOL4	O94818	638 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	DCN	P07585	359 aa	Known RBP	13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	GLUL	P15104	373 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	MAGEA11	P43364	429 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	MRE11	P49959	708 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	NLRP12	P59046	1061 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	DLG4	P78352	724 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	FCHO2	Q0JRZ9	810 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	BIRC3	Q13489	604 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	MAPRE1	Q15691	268 aa	Known RBP	13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	SDHAF4	Q5VUM1	108 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	CEP135	Q66GS9	1140 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	TPRG1	Q6ZUI0	275 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	STKLD1	Q8NE28	680 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	ENGASE	Q8NFI3	743 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	TMC2	Q8TDI7	906 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	ATOH1	Q92858	354 aa	Predicted RBP	13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	TRMT2B	Q96GJ1	504 aa	Known RBP	13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	OSBPL6	Q9BZF3	934 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	LTB4R2	Q9NPC1	389 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	OBP2A	Q9NY56	170 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	MAPK8IP1	Q9UQF2	711 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	FRMD4B	Q9Y2L6	1034 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	USP34	Q70CQ2	3546 aa		13.26	□□□□□ -0.29
STRN4-223	ENST00000602223	GOLGA6L4	A6NEF3	574 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	SLC38A8	A6NNN8	435 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF263	O14978	683 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	CHAD	O15335	359 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	LRRN2	O75325	713 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	TADA3	O75528	432 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	VNN1	O95497	513 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	PRAMEF12	O95522	483 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	PDGFRB	P09619	1106 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	CD72	P21854	359 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	NR2F2	P24468	414 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	DDX6	P26196	483 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	GNL1	P36915	607 aa	Predicted RBP	13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	PNOC	Q13519	176 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	NCOA4	Q13772	614 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	UBXN2B	Q14CS0	331 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	ANGPT1	Q15389	498 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF699	Q32M78	642 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	ZACN	Q401N2	412 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	ZCWPW2	Q504Y3	356 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	C1orf220	Q5T0J3	134 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	VSTM1	Q6UX27	236 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	SCN4B	Q8IWT1	228 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	YAF2	Q8IY57	180 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	OR6B3	Q8NGW1	331 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	MYCBPAP	Q8TBZ2	947 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	PCED1B	Q96HM7	432 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	MYRFL	Q96LU7	910 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	LRRC3B	Q96PB8	259 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	SLC46A2	Q9BY10	475 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	SNX25	Q9H3E2	840 aa		13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	UXT	Q9UBK9	157 aa	Predicted RBP	13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	NXF1	Q9UBU9	619 aa	Known RBP	13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	MTF2	Q9Y483	593 aa	Predicted RBP	13.25	□□□□□ -0.29
STRN4-223	ENST00000602223	FAM170B	A6NMN3	283 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	SOBP	A7XYQ1	873 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	DPYSL4	O14531	572 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	IKBKB	O14920	756 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	AKAP3	O75969	853 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	BDNF	P23560	247 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	TARS	P26639	723 aa	Known RBP	13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	VAMP7	P51809	220 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	CYP27A1	Q02318	531 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	FAM160A1	Q05DH4	1040 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	ENPEP	Q07075	957 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF667	Q5HYK9	610 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	MDH1B	Q5I0G3	518 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	ZNF852	Q6ZMS4	543 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	SV2A	Q7L0J3	742 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	GPIHBP1	Q8IV16	184 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	CMTM8	Q8IZV2	173 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	MRPS31	Q92665	395 aa	Known RBP	13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	SPATA17	Q96L03	361 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	CEP295NL	Q96MC4	621 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	TIGD1	Q96MW7	591 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	NELL2	Q99435	816 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	DPEP3	Q9H4B8	488 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	SMYD3	Q9H7B4	428 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	VPS13A	Q96RL7	3174 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	ATG2B	Q96BY7	2078 aa		13.24	□□□□□ -0.29
STRN4-223	ENST00000602223	MYO16	Q9Y6X6	1858 aa		13.23	□□□□□ -0.29
STRN4-223	ENST00000602223		A8MXQ7	604 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms