RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 MYLPFQ96A32 169 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 ASIC4Q96FT7 647 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 PCED1BQ96HM7 432 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 RPP25Q9BUL9 199 aaKnown RBP17.85■□□□□ 0.45
SSBP4-213ENST00000602088 BCO2Q9BYV7 579 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 NUP62CLQ9H1M0 184 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 APOBEC3GQ9HC16 384 aaKnown RBP17.85■□□□□ 0.45
SSBP4-213ENST00000602088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.459e-8■■■■■ 116.8
SSBP4-213ENST00000602088 DUSP12Q9UNI6 340 aa17.85■□□□□ 0.45
SSBP4-213ENST00000602088 A0A1W2PRU2 124 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 FGF19O95750 216 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 CSH1P0DML2 217 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 CSH2P0DML3 217 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 HMGA1P17096 107 aaKnown RBP17.84■□□□□ 0.45
SSBP4-213ENST00000602088 BDNFP23560 247 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 GABRR2P28476 465 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 NOP14P78316 857 aaKnown RBP17.84■□□□□ 0.45
SSBP4-213ENST00000602088 CYP27A1Q02318 531 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 TEAD2Q15562 447 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 TAF12Q16514 161 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 CBWD6Q4V339 395 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 DCAF17Q5H9S7 520 aaPredicted RBP17.84■□□□□ 0.45
SSBP4-213ENST00000602088 CBWD3Q5JTY5 395 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 CBWD5Q5RIA9 395 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 SDHAF4Q5VUM1 108 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 VSTM1Q6UX27 236 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 BMP8AQ7Z5Y6 402 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 B3GALNT2Q8NCR0 500 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 SEMA4DQ92854 862 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 ZSWIM3Q96MP5 696 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 GPR88Q9GZN0 384 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 IL21Q9HBE4 155 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 RAB20Q9NX57 234 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 COQ4Q9Y3A0 265 aa17.84■□□□□ 0.45
SSBP4-213ENST00000602088 PTPRDP23468 1912 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 GOLGA6L22H0YM25 854 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 NARSO43776 548 aaKnown RBP17.83■□□□□ 0.44
SSBP4-213ENST00000602088 NDST1P52848 882 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 CCDC40Q4G0X9 1142 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 FAM78AQ5JUQ0 283 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 HFE2Q6ZVN8 426 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 SCN4BQ8IWT1 228 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 MLKLQ8NB16 471 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 CCDC150Q8NCX0 1101 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 FAXDC2Q96IV6 333 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 TNIP3Q96KP6 325 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 ASB16Q96NS5 453 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 SRRTQ9BXP5 876 aaKnown RBP17.83■□□□□ 0.44
SSBP4-213ENST00000602088 ATXN3LQ9H3M9 355 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 CYP3A43Q9HB55 503 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 RWDD2AQ9UIY3 292 aa17.83■□□□□ 0.44
SSBP4-213ENST00000602088 SRFP11831 508 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 FCARP24071 287 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 INCA1Q0VD86 236 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 TANGO2Q6ICL3 276 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 UNC93AQ86WB7 457 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 CRYBG2Q8N1P7 616 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 STKLD1Q8NE28 680 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 GPT2Q8TD30 523 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 PBXIP1Q96AQ6 731 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 ELSPBP1Q96BH3 223 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 MYRFLQ96LU7 910 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 MED15Q96RN5 788 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 KXD1Q9BQD3 176 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 B3GNT5Q9BYG0 378 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 NIF3L1Q9GZT8 377 aa17.82■□□□□ 0.44
SSBP4-213ENST00000602088 SLC38A8A6NNN8 435 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 ECI2O75521 394 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 NOL4O94818 638 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 GNA14O95837 355 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 CDC25CP30307 473 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 GRIK1P39086 918 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 MARSP56192 900 aaKnown RBP17.81■□□□□ 0.44
SSBP4-213ENST00000602088 WDR44Q5JSH3 913 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 STXBP5Q5T5C0 1151 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 TMEM150AQ86TG1 271 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 ACOT1Q86TX2 421 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 TRIM59Q8IWR1 403 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 SMARCD2Q92925 531 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 TRMT2BQ96GJ1 504 aaKnown RBP17.81■□□□□ 0.44
SSBP4-213ENST00000602088 SPATA17Q96L03 361 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 CEP295NLQ96MC4 621 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 PLA2G2FQ9BZM2 168 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 ELOVL4Q9GZR5 314 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 SLITRK6Q9H5Y7 841 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 TRPV4Q9HBA0 871 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 HMGXB4Q9UGU5 601 aa17.81■□□□□ 0.44
SSBP4-213ENST00000602088 MAGED2Q9UNF1 606 aaPredicted RBP17.81■□□□□ 0.44
SSBP4-213ENST00000602088 CLDN5O00501 218 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 PMM2O15305 246 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 FGFR1OPO95684 399 aaKnown RBP17.8■□□□□ 0.44
SSBP4-213ENST00000602088 F11P03951 625 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 FMO5P49326 533 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 CACNA2D1P54289 1103 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 NLRP12P59046 1061 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 ARHGAP15Q53QZ3 475 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 PAQR9Q6ZVX9 377 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 ZSCAN18Q8TBC5 510 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-213ENST00000602088 TATDN2Q93075 761 aa17.8■□□□□ 0.44
SSBP4-213ENST00000602088 C8orf48Q96LL4 319 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms