RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 UNC5CO95185 931 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 KRT3P12035 628 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 IRX3P78415 501 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 LACTBP83111 547 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 TFDP1Q14186 410 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 DHX37Q8IY37 1157 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 CEP120Q8N960 986 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 CPT1BQ92523 772 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 PSMC3IPQ9P2W1 217 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 TYROBPO43914 113 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 FGFR1P11362 822 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 MSH2P43246 934 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 MOGSQ13724 837 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 PDK4Q16654 411 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 POLNQ7Z5Q5 900 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 N4BP2L2Q92802 583 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 ERP27Q96DN0 273 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 WDR83Q9BRX9 315 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 CXorf56Q9H5V9 222 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 ETNK1Q9HBU6 452 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 SENP1Q9P0U3 644 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 RABGEF1Q9UJ41 708 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 CHKBQ9Y259 395 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 LOC285556D6RIA3 1793 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 KRT4P19013 534 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 CCDC15Q0P6D6 951 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 MAPK6Q16659 721 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 LY6KQ17RY6 165 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 FAM160B1Q5W0V3 765 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 CHST13Q8NET6 341 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 LRRC8CQ8TDW0 803 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 SLC24A2Q9UI40 661 aa21.25■□□□□ 0.99
SHKBP1-225ENST00000600733 TCRBV7S3A2A0A539 114 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 GJB1P08034 283 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 RPSAP08865 295 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 SLC18A1P54219 525 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 CDH8P55286 799 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 GEMIN4P57678 1058 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 MYO1EQ12965 1108 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 EFHC2Q5JST6 749 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 CDCA2Q69YH5 1023 aaPredicted RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 RHPN2Q8IUC4 686 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 FBF1Q8TES7 1133 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 PYROXD1Q8WU10 500 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 TACO1Q9BSH4 297 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 STRIP2Q9ULQ0 834 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 SOWAHBA6NEL2 793 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 SIGLEC16A6NMB1 481 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 EDF1O60869 148 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 ELF1P32519 619 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 NRLP54845 237 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 PSMC1P62191 440 aaKnown RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 TAF5Q15542 800 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 TREML2Q5T2D2 321 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 LVRNQ6Q4G3 990 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 RGS9BPQ6ZS82 235 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 PPIL6Q8IXY8 311 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 L3MBTL3Q96JM7 780 aaPredicted RBP21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 CPXM1Q96SM3 734 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 PCSK1NQ9UHG2 260 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 SNCAIPQ9Y6H5 919 aa21.24■□□□□ 0.99
SHKBP1-225ENST00000600733 B4GALT5O43286 388 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 KRT19P08727 400 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 KDELR1P24390 212 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 RPL22P35268 128 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 YARSP54577 528 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 HHATQ5VTY9 493 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 IER5Q5VY09 327 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 NAT8LQ8N9F0 302 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 SEPT1Q8WYJ6 367 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 EBF2Q9HAK2 575 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 METTL5Q9NRN9 209 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 BTBD7Q9P203 1132 aa21.23■□□□□ 0.99
SHKBP1-225ENST00000600733 LOC102724159A0A0B4J2E5 919 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 ANP32DO95626 131 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 KRT7P08729 469 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 SKIV2L2P42285 1042 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 YWHAEP62258 255 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 SETDB1Q15047 1291 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 PWP2Q15269 919 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 C3orf62Q6ZUJ4 267 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 BBS12Q6ZW61 710 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 PCGF5Q86SE9 256 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 VSIG1Q86XK7 387 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 ZBTB8OSQ8IWT0 167 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 UNC45BQ8IWX7 931 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 TMEM192Q8IY95 271 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 RSAD2Q8WXG1 361 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 TMEM237Q96Q45 408 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 LRRC37BQ96QE4 947 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 USH1CQ9Y6N9 552 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 ZBTB42B2RXF5 422 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 TMEM63AO94886 807 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 TARSP26639 723 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 POLR2BP30876 1174 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 ARL4CP56559 192 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 FAM182AQ5T1J6 154 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 TLDC1Q6P9B6 456 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 ATP11CQ8NB49 1132 aa21.22■□□□□ 0.99
SHKBP1-225ENST00000600733 FBXO36Q8NEA4 188 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms