RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DDX3YO15523 660 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 CYP11A1P05108 521 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 SNX16P57768 344 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 RNASELQ05823 741 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 CFAP221Q4G0U5 840 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 NECAB2Q7Z6G3 386 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 ZNF280BQ86YH2 543 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 COLGALT2Q8IYK4 626 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 UBL4BQ8N7F7 174 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 ANKRD52Q8NB46 1076 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 IPO4Q8TEX9 1081 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 STK32AQ8WU08 396 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 RSPH1Q8WYR4 309 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 UBXN4Q92575 508 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 TMEM191CA6NGB0 347 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 PSMC1P62191 440 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 PPP1R15BQ5SWA1 713 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 CYP4A22Q5TCH4 519 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 RSRC2Q7L4I2 434 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 CRIPAKQ8N1N5 446 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 SLC35F5Q8WV83 523 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 SUSD3Q96L08 255 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 HNRNPABQ99729 332 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 LPIN3Q9BQK8 851 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 IP6K2Q9UHH9 426 aa18.65■□□□□ 0.58
SHKBP1-224ENST00000600718 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 SIGLEC16A6NMB1 481 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 TMEM189-UBE2V1I3L0A0 370 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 PDE2AO00408 941 aaPredicted RBP18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 SPOPO43791 374 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 PROSCO94903 275 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 ERBB2P04626 1255 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 BRCC3P46736 316 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 BCAT1P54687 386 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 DCUN1D2Q6PH85 259 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 XYLT1Q86Y38 959 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 CD101Q93033 1021 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 CASD1Q96PB1 797 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 TRIM7Q9C029 511 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 CDH9Q9ULB4 789 aa18.64■□□□□ 0.58
SHKBP1-224ENST00000600718 TDRD15B5MCY1 1934 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 TANC1Q9C0D5 1861 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 CCDC66A2RUB6 948 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 CCDC130P13994 396 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 CTNNA2P26232 953 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 PCSK1P29120 753 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 ITIH3Q06033 890 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 BST2Q10589 180 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 CNKSR3Q6P9H4 555 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 NPAS4Q8IUM7 802 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 MCRS1Q96EZ8 462 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 SLC4A5Q9BY07 1137 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 ST7Q9NRC1 585 aa18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 TIMM13Q9Y5L4 95 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-224ENST00000600718 ATP2C2O75185 946 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 KRT3P12035 628 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 TYMPP19971 482 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 ADORA2BP29275 332 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 MAN1A1P33908 653 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 PDE4CQ08493 712 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 IKBKEQ14164 716 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 PAN2Q504Q3 1202 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 TMEM110Q86TL2 294 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 SLC2A14Q8TDB8 520 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 ACTRT1Q8TDG2 376 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 MS4A14Q96JA4 679 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 SYT15Q9BQS2 421 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 CARD9Q9H257 536 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 CYLDQ9NQC7 956 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 TJP2Q9UDY2 1190 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 PCDHA3Q9Y5H8 950 aa18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-224ENST00000600718 GOLGA8SH3BPF8 625 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 I3L4J1 428 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 CEP104O60308 925 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 B4GALT3O60512 393 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 CTNNA1P35221 906 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 OR1G1P47890 313 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 RPL7AP62424 266 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 NAA30Q147X3 362 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 PMF1Q6P1K2 205 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 RASGEF1CQ8N431 466 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 MCEEQ96PE7 176 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 PCDHB8Q9UN66 801 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 GJB6O95452 261 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 PEX5P50542 639 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 SLC8A3P57103 927 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 KIAA0319Q5VV43 1072 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 FUKQ8N0W3 1084 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 THEM5Q8N1Q8 247 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 HASPINQ8TF76 798 aa18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 ACBD6Q9BR61 282 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms