RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 EDEM3Q9BZQ6 932 aa21.27■■□□□ 1
SHKBP1-222ENST00000600320 SLC27A5Q9Y2P5 690 aa21.27■■□□□ 1
SHKBP1-222ENST00000600320 PCDHB5Q9Y5E4 795 aa21.27■■□□□ 1
SHKBP1-222ENST00000600320 A0A1W2PQJ5 194 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 LRRC53A6NM62 1247 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 SOAT2O75908 522 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 VDRP11473 427 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 ADORA2BP29275 332 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 SSTR3P32745 418 aaPredicted RBP21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 CACNA2D1P54289 1103 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 DUSP4Q13115 394 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 MAPRE1Q15691 268 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 ARHGAP17Q68EM7 881 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 FAM35AQ86V20 835 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 SLC47A2Q86VL8 602 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 EFHBQ8N7U6 833 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 CYP4F11Q9HBI6 524 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 MAN1C1Q9NR34 630 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 TMEM30AQ9NV96 361 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 CAPN11Q9UMQ6 739 aa21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.26■□□□□ 0.99
SHKBP1-222ENST00000600320 O00370 1275 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 C1RP00736 705 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 HAPLN1P10915 354 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 BDNFP23560 247 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 CYP2F1P24903 491 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 CASP14P31944 242 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 GPR15P49685 360 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 GOLGA8FQ08AF8 430 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 GOLGA8DPQ0D2H9 430 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 SMARCB1Q12824 385 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 TBX2Q13207 712 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 SGO2Q562F6 1265 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 SMYD5Q6GMV2 418 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 C4orf50Q6ZRC1 276 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 FEZF2Q8TBJ5 459 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 SPPL2BQ8TCT7 592 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 C2orf15Q8WU43 125 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 HNRNPABQ99729 332 aaKnown RBP21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 MED10Q9BTT4 135 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 PTPRDP23468 1912 aa21.25■□□□□ 0.99
SHKBP1-222ENST00000600320 GNA15P30679 374 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 ADAM15Q13444 863 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 GSE1Q14687 1217 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 GOLGA7BQ2TAP0 167 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 CFAP221Q4G0U5 840 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 TCEAL8Q8IYN2 117 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 FUBP3Q96I24 572 aaKnown RBP eCLIP21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 DNAI2Q9GZS0 605 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 ABCB6Q9NP58 842 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 KIAA1257Q9ULG3 409 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 MYO6Q9UM54 1294 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 YIPF1Q9Y548 306 aa21.24■□□□□ 0.99
SHKBP1-222ENST00000600320 MTCL1Q9Y4B5 1905 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 PRRG1O14668 218 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 THAP12O43422 761 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 C8AP07357 584 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 CFHP08603 1231 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 CYP11B1P15538 503 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 ELF1P32519 619 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 ZBED6P86452 979 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 PTK2Q05397 1052 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 TRIM14Q14142 442 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 CCDC85BQ15834 202 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 MGAT5BQ3V5L5 792 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 NOP9Q86U38 636 aaKnown RBP21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 TTC30AQ86WT1 665 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 ZMIZ2Q8NF64 920 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 SLC7A14Q8TBB6 771 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 ZNF606Q8WXB4 792 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 IQCDQ96DY2 449 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 SEPT5Q99719 369 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 KRT82Q9NSB4 513 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 TSPAN16Q9UKR8 245 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 INSL5Q9Y5Q6 135 aa21.23■□□□□ 0.99
SHKBP1-222ENST00000600320 BEST1O76090 585 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 MICAL2O94851 1124 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 CDC25BP30305 580 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 MAGEA11P43364 429 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 ARID5AQ03989 594 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 COL19A1Q14993 1142 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 CNGA2Q16280 664 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 CTC1Q2NKJ3 1217 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 LIN9Q5TKA1 542 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 SDHAF4Q5VUM1 108 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 LCLAT1Q6UWP7 414 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 TMEM184AQ6ZMB5 413 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 IRF2BP2Q7Z5L9 587 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 EPS8L1Q8TE68 723 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 CASP10Q92851 521 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 SMOQ99835 787 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 PLEKHA4Q9H4M7 779 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 HSFX1Q9UBD0 423 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 MAFFQ9ULX9 164 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 LUC7L2Q9Y383 392 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 CDH23Q9H251 3354 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 COL6A3P12111 3177 aa21.22■□□□□ 0.99
SHKBP1-222ENST00000600320 TBX10O75333 385 aa21.21■□□□□ 0.99
SHKBP1-222ENST00000600320 RFPL2O75678 378 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms