RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 HSFY1Q96LI6 401 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CRTAC1Q9NQ79 661 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 DZANK1Q9NVP4 752 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 TMEM51Q9NW97 253 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 ZDHHC7Q9NXF8 308 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 GTF3C4Q9UKN8 822 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CEP83Q9Y592 693 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 WDR27A2RRH5 827 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 EPOPA6NHQ4 379 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 RNF225M0QZC1 329 aaPredicted RBP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 O00370 1275 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 SOX1O00570 391 aaPredicted RBP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 C2CD2LO14523 706 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 GZMAP12544 262 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 FECHP22830 423 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 USP8P40818 1118 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 RPL34P49207 117 aaKnown RBP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 CDR2Q01850 454 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 APBA1Q02410 837 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 ASIC2Q16515 512 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 SLC39A12Q504Y0 691 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 PKDCCQ504Y2 493 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 PLPP4Q5VZY2 271 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 LEMD2Q8NC56 503 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 KCTD13Q8WZ19 329 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 NOX5Q96PH1 765 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 TWNKQ96RR1 684 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
TGFB1-204ENST00000600196 NME7Q9Y5B8 376 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 MTCH2Q9Y6C9 303 aa13.03□□□□□ -0.32
TGFB1-204ENST00000600196 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.32
TGFB1-204ENST00000600196 MTMR11A4FU01 709 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 SOBPA7XYQ1 873 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 TGM5O43548 720 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 FAM200BP0CF97 657 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 CD19P15391 556 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 ACAT1P24752 427 aaKnown RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 IRS1P35568 1242 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 ACADSBP45954 432 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 PPP3CCP48454 512 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 BCAT1P54687 386 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 KLHL30Q0D2K2 578 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 BST2Q10589 180 aaKnown RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 ZNF394Q53GI3 561 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 MDH1BQ5I0G3 518 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 SPRED2Q7Z698 418 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 ITIH5Q86UX2 942 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 TC2NQ8N9U0 490 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 GDPD5Q8WTR4 605 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 DDX1Q92499 740 aaKnown RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 MYLPFQ96A32 169 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 B3GALT6Q96L58 329 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 B3GNT5Q9BYG0 378 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 DMAP1Q9NPF5 467 aaPredicted RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 ZMYM5Q9UJ78 669 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 NOCTQ9UK39 431 aaKnown RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 AJAP1Q9UKB5 411 aaPredicted RBP13.02□□□□□ -0.33
TGFB1-204ENST00000600196 CHD9Q3L8U1 2897 aa13.02□□□□□ -0.33
TGFB1-204ENST00000600196 MYO9BQ13459 2157 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 XPO1O14980 1071 aaKnown RBP13.01□□□□□ -0.33
TGFB1-204ENST00000600196 THAP12O43422 761 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 NRDCO43847 1150 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 ZMYND10O75800 440 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 FGF19O95750 216 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 NPR3P17342 541 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 GPD2P43304 727 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 PLA2G4AP47712 749 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 CYP27A1Q02318 531 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 ADAM15Q13444 863 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 CTC1Q2NKJ3 1217 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 PPP1R26Q5T8A7 1209 aaPredicted RBP13.01□□□□□ -0.33
TGFB1-204ENST00000600196 LIN9Q5TKA1 542 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
TGFB1-204ENST00000600196 FAM35AQ86V20 835 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms