RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 KXD1Q9BQD3 176 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 TBC1D17Q9HA65 648 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 TRPV4Q9HBA0 871 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 ABCB6Q9NP58 842 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 ARMCX3Q9UH62 379 aaPredicted RBP13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 CA14Q9ULX7 337 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 SLC27A5Q9Y2P5 690 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 PCDHB5Q9Y5E4 795 aa13.71□□□□□ -0.21
SH2D3A-208ENST00000599563 KRBA1A5PL33 1030 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 AP5Z1O43299 807 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 LRRN2O75325 713 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 CAVIN2O95810 425 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 KRT13P13646 458 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 TNNI1P19237 187 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 MTIF2P46199 727 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 AP3M2P53677 418 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 GPC5P78333 572 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 TCF15Q12870 199 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 TAF12Q16514 161 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 MGAT5BQ3V5L5 792 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 ARHGAP15Q53QZ3 475 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 FAM78AQ5JUQ0 283 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 TCERG1LQ5VWI1 586 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 INTS8Q75QN2 995 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 DNAJB7Q7Z6W7 309 aaPredicted RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 PDCL2Q8N4E4 241 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 CXorf38Q8TB03 319 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 DEPDC1BQ8WUY9 529 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 ELMO3Q96BJ8 720 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 TCEAL4Q96EI5 215 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 ASB16Q96NS5 453 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 NELL2Q99435 816 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 RPP25Q9BUL9 199 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 OSBPL6Q9BZF3 934 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 CRISPLD1Q9H336 500 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 SLITRK6Q9H5Y7 841 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 SNX9Q9Y5X1 595 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 MYH10P35580 1976 aa13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 ZNF638Q14966 1978 aaKnown RBP13.7□□□□□ -0.22
SH2D3A-208ENST00000599563 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 GNA14O95837 355 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 FAM163BP0C2L3 166 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 HAPLN1P10915 354 aaPredicted RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 CDC25CP30307 473 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 CCR2P41597 374 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 GCLMP48507 274 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 COPB1P53618 953 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 STARD6P59095 220 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 RPL10AP62906 217 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 MLF2Q15773 248 aaPredicted RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 CBWD6Q4V339 395 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 CBWD3Q5JTY5 395 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 CBWD5Q5RIA9 395 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 TRAPPC11Q7Z392 1133 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 TMC8Q8IU68 726 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 FAM114A1Q8IWE2 563 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 CCDC105Q8IYK2 499 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 ZSCAN18Q8TBC5 510 aaPredicted RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 IRF7Q92985 503 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 TMEM209Q96SK2 561 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 TRMT61BQ9BVS5 477 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 LRRC3Q9BY71 257 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 VPS16Q9H269 839 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 TRPV5Q9NQA5 729 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 DDX43Q9NXZ2 648 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 ABI2Q9NYB9 513 aaPredicted RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 LIMA1Q9UHB6 759 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 MRPS17Q9Y2R5 130 aaKnown RBP13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
SH2D3A-208ENST00000599563 PTPRDP23468 1912 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 GABRDO14764 452 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 MOSPD3O75425 235 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 C4BPAP04003 597 aaKnown RBP13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 PSMC3P17980 439 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 WEE1P30291 646 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 ATICP31939 592 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 MAGEA9P43362 315 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 CLDN10P78369 228 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 TEAD2Q15562 447 aa13.68□□□□□ -0.22
SH2D3A-208ENST00000599563 MAN2A1Q16706 1144 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms