RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 CBWD2Q8IUF1 395 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 DCLK2Q8N568 766 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 MAB21L3Q8N8X9 362 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 FSIP1Q8NA03 581 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 STKLD1Q8NE28 680 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 SECISBP2LQ93073 1101 aaKnown RBP20.09■□□□□ 0.81
PNKP-213ENST00000599543 PTPRJQ12913 1337 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 GREB1Q4ZG55 1949 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 F11P03951 625 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 CYP2F1P24903 491 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 AFMP43652 599 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 CXCL12P48061 93 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 NDUFA8P51970 172 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 TNK2Q07912 1038 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 DDR2Q16832 855 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 DUOXA2Q1HG44 320 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 FAM26FQ5R3K3 315 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 SDHAF4Q5VUM1 108 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 SCARA3Q6AZY7 606 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 ERMP1Q7Z2K6 904 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 SPATA2LQ8IUW3 424 aaPredicted RBP20.08■□□□□ 0.81
PNKP-213ENST00000599543 OR5B17Q8NGF7 314 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 MRPS31Q92665 395 aaKnown RBP20.08■□□□□ 0.81
PNKP-213ENST00000599543 HPDLQ96IR7 371 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 MAGEF1Q9HAY2 307 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 KIAA1586Q9HCI6 787 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 RBM12Q9NTZ6 932 aaKnown RBP20.08■□□□□ 0.81
PNKP-213ENST00000599543 UXTQ9UBK9 157 aaPredicted RBP20.08■□□□□ 0.81
PNKP-213ENST00000599543 GTF3C4Q9UKN8 822 aa20.08■□□□□ 0.81
PNKP-213ENST00000599543 PTPRDP23468 1912 aa20.08■□□□□ 0.8
PNKP-213ENST00000599543 ANAPC1Q9H1A4 1944 aa20.08■□□□□ 0.8
PNKP-213ENST00000599543 UBE4BO95155 1302 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 TDGF1P13385 188 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 CMA1P23946 247 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 HOXD13P35453 343 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 SATB1Q01826 763 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 PON2Q15165 354 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 SOWAHAQ2M3V2 549 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 ITPRIPL2Q3MIP1 535 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 DGKKQ5KSL6 1271 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 TXNDC8Q6A555 127 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 CNNM4Q6P4Q7 775 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 TXNDC11Q6PKC3 985 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 OSTM1Q86WC4 334 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 WDR49Q8IV35 697 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 SPEM1Q8N4L4 309 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 PKMYT1Q99640 499 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 BLZF1Q9H2G9 400 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 KIF9Q9HAQ2 790 aa20.07■□□□□ 0.8
PNKP-213ENST00000599543 SOBPA7XYQ1 873 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 GABRDO14764 452 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 HCRTO43612 131 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 ACTN4O43707 911 aaKnown RBP20.06■□□□□ 0.8
PNKP-213ENST00000599543 SNRNP35Q16560 246 aaKnown RBP20.06■□□□□ 0.8
PNKP-213ENST00000599543 CFAP221Q4G0U5 840 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 C4orf50Q6ZRC1 276 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 EPM2AIP1Q7L775 607 aaPredicted RBP20.06■□□□□ 0.8
PNKP-213ENST00000599543 DPH6Q7L8W6 267 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 ZNF507Q8TCN5 953 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 USP13Q92995 863 aaPredicted RBP20.06■□□□□ 0.8
PNKP-213ENST00000599543 TRMT2BQ96GJ1 504 aaKnown RBP20.06■□□□□ 0.8
PNKP-213ENST00000599543 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
PNKP-213ENST00000599543 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
PNKP-213ENST00000599543 C7orf25Q9BPX7 421 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 AGPAT3Q9NRZ7 376 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 TDP1Q9NUW8 608 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 HPSEQ9Y251 543 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 CCL26Q9Y258 94 aa20.06■□□□□ 0.8
PNKP-213ENST00000599543 NOL4O94818 638 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 DLATP10515 647 aaKnown RBP20.05■□□□□ 0.8
PNKP-213ENST00000599543 GAS6Q14393 721 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 CCDC142Q17RM4 750 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 CC2D1AQ6P1N0 951 aaPredicted RBP20.05■□□□□ 0.8
PNKP-213ENST00000599543 Q6ZS52 159 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 UNC13DQ70J99 1090 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 HS2ST1Q7LGA3 356 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 MON1AQ86VX9 555 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 SCN4BQ8IWT1 228 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 RDH13Q8NBN7 331 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 RMDN1Q96DB5 314 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 FNBP1Q96RU3 617 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 MMS19Q96T76 1030 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 SYT15Q9BQS2 421 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 TRPC7Q9HCX4 862 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 GKN1Q9NS71 199 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 RAB23Q9ULC3 237 aa20.05■□□□□ 0.8
PNKP-213ENST00000599543 HELZP42694 1942 aaKnown RBP20.05■□□□□ 0.8
PNKP-213ENST00000599543 ATG2BQ96BY7 2078 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 TNNI1P19237 187 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 SYKP43405 635 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 CYP2J2P51589 502 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 PSMC1P62191 440 aaKnown RBP20.04■□□□□ 0.8
PNKP-213ENST00000599543 SNRPFP62306 86 aaKnown RBP20.04■□□□□ 0.8
PNKP-213ENST00000599543 CCINQ13939 588 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 MAPRE1Q15691 268 aaKnown RBP20.04■□□□□ 0.8
PNKP-213ENST00000599543 NELFCDQ8IXH7 590 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 CEP57L1Q8IYX8 460 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 GPR161Q8N6U8 529 aaKnown RBP20.04■□□□□ 0.8
PNKP-213ENST00000599543 KBTBD7Q8WVZ9 684 aa20.04■□□□□ 0.8
PNKP-213ENST00000599543 MYRFLQ96LU7 910 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms