RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PCDHB2Q9Y5E7 798 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 TP53BP2Q13625 1128 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 SNX17Q15036 470 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 TMED8Q6PL24 325 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 ASZ1Q8WWH4 475 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 THAP2Q9H0W7 228 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 CRLS1Q9UJA2 301 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 RAB14P61106 215 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 CSTF3Q12996 717 aaKnown RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 AMHR2Q16671 573 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 ZCWPW2Q504Y3 356 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 TRAPPC11Q7Z392 1133 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 CENPLQ8N0S6 344 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 MMGT1Q8N4V1 131 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 ATG4AQ8WYN0 398 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 GEMIN8Q9NWZ8 242 aaKnown RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 SNX13Q9Y5W8 968 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 VWA5AO00534 786 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 DDHD2O94830 711 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 SUPT7LO94864 414 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 NQO1P15559 274 aaKnown RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 FLCNQ8NFG4 579 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 FAM136AQ96C01 138 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 NSUN4Q96CB9 384 aaKnown RBP12.29□□□□□ -0.44
SCN8A-208ENST00000599343 C10orf88Q9H8K7 445 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 NAGPAQ9UK23 515 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
SCN8A-208ENST00000599343 A0A1W2PQJ5 194 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ITGA4P13612 1032 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 TGM2P21980 687 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 HSPA13P48723 471 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 FAM83EQ2M2I3 478 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 SV2CQ496J9 727 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 C10orf120Q5SQS8 335 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 FOXP3Q9BZS1 431 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ILKAPQ9H0C8 392 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 SMARCAD1Q9H4L7 1026 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 UBXN8O00124 270 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 SOAT2O75908 522 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ACADSP16219 412 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 GLRBP48167 497 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CORO7P57737 925 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 RPS7P62081 194 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 NAPEPLDQ6IQ20 393 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 BLOC1S5Q8TDH9 187 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 IGDCC4Q8TDY8 1250 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CARD9Q9H257 536 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 PYGMP11217 842 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ACADSBP45954 432 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 KCNJ6P48051 423 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 NLRP9Q7RTR0 991 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 KAT2BQ92831 832 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 SERPINB12Q96P63 405 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 PNKPQ96T60 521 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 EIF3LQ9Y262 564 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ZNF609O15014 1411 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 LRRIQ3A6PVS8 624 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 EXTL3O43909 919 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 IL18RAPO95256 599 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 PARNO95453 639 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CD4P01730 458 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ALOX15P16050 662 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 HOXD10P28358 340 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CYP51A1Q16850 503 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 PGS1Q32NB8 556 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 COL23A1Q86Y22 540 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 MRPS26Q9BYN8 205 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 KLHL25Q9H0H3 589 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 CYP4F12Q9HCS2 524 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 PDP2Q9P2J9 529 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 TRMT6Q9UJA5 497 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 FLT1P17948 1338 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 TNPO2O14787 897 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 ZBTB7AO95365 584 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 NPTXRO95502 500 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 NDUFB10O96000 172 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 GRK2P25098 689 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 C2CD6Q53TS8 623 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 EFL1Q7Z2Z2 1120 aaKnown RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 SH3GL1Q99961 368 aa12.28□□□□□ -0.44
SCN8A-208ENST00000599343 PRG3Q9Y2Y8 225 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-208ENST00000599343 OR1G1P47890 313 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 VN1R5Q7Z5H4 357 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 SUGP1Q8IWZ8 645 aaKnown RBP12.27□□□□□ -0.44
SCN8A-208ENST00000599343 FBXO36Q8NEA4 188 aa12.27□□□□□ -0.44
SCN8A-208ENST00000599343 ZBTB10Q96DT7 871 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms