RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SEMA4GQ9NTN9 838 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 GTF3C4Q9UKN8 822 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 MTMR6Q9Y217 621 aa15.77■□□□□ 0.12
IRF3-223ENST00000599223 MAP1BP46821 2468 aaKnown RBP15.77■□□□□ 0.11
IRF3-223ENST00000599223 GDF9O60383 454 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 EGFP01133 1207 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 DDX6P26196 483 aaKnown RBP eCLIP15.76■□□□□ 0.11
IRF3-223ENST00000599223 HOXA6P31267 233 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 HOXD13P35453 343 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 TXLNAP40222 546 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 NFE2Q16621 373 aaPredicted RBP15.76■□□□□ 0.11
IRF3-223ENST00000599223 SOWAHAQ2M3V2 549 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 CCDC73Q6ZRK6 1079 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 PRR23CQ6ZRP0 262 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 MON1AQ86VX9 555 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 WDR5BQ86VZ2 330 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 SYCP3Q8IZU3 236 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 CSGALNACT2Q8N6G5 542 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 OR5B17Q8NGF7 314 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 KBTBD7Q8WVZ9 684 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 EZH1Q92800 747 aaPredicted RBP15.76■□□□□ 0.11
IRF3-223ENST00000599223 ACBD6Q9BR61 282 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 ABCB6Q9NP58 842 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 TDP1Q9NUW8 608 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 PANK4Q9NVE7 773 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 THG1LQ9NWX6 298 aaKnown RBP15.76■□□□□ 0.11
IRF3-223ENST00000599223 GDAP2Q9NXN4 497 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 ITGA11Q9UKX5 1188 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 SNX9Q9Y5X1 595 aa15.76■□□□□ 0.11
IRF3-223ENST00000599223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.75■□□□□ 0.11
IRF3-223ENST00000599223 GABRDO14764 452 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 HUS1O60921 280 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 ATP2C2O75185 946 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 KRT19P08727 400 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 CSH1P0DML2 217 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 CSH2P0DML3 217 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 PDCP20941 246 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 PSMC1P62191 440 aaKnown RBP15.75■□□□□ 0.11
IRF3-223ENST00000599223 USP4Q13107 963 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 ZNF77Q15935 545 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 CBWD2Q8IUF1 395 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 TMEM86AQ8N2M4 240 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 SYNPOQ8N3V7 929 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 PDILTQ8N807 584 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 MRPS31Q92665 395 aaKnown RBP15.75■□□□□ 0.11
IRF3-223ENST00000599223 TRMT2BQ96GJ1 504 aaKnown RBP15.75■□□□□ 0.11
IRF3-223ENST00000599223 MYRFLQ96LU7 910 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 CNTNAP3BQ96NU0 1288 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 RTKNQ9BST9 563 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 CNTNAP3Q9BZ76 1288 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 KIF9Q9HAQ2 790 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 ZMYM5Q9UJ78 669 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 NME7Q9Y5B8 376 aa15.75■□□□□ 0.11
IRF3-223ENST00000599223 MORC2Q9Y6X9 1032 aaPredicted RBP15.75■□□□□ 0.11
IRF3-223ENST00000599223 TRDMT1O14717 391 aaKnown RBP15.74■□□□□ 0.11
IRF3-223ENST00000599223 SLC30A4O14863 429 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 LRP3O75074 770 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 RNF40O75150 1001 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 SDHBP21912 280 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 CNR2P34972 360 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 MYL7Q01449 175 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 ALCAMQ13740 583 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 ZNF268Q14587 947 aaPredicted RBP15.74■□□□□ 0.11
IRF3-223ENST00000599223 MTF1Q14872 753 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 SLC39A14Q15043 492 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 CCDC6Q16204 474 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 E2F4Q16254 413 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 CSRP2Q16527 193 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 CFAP221Q4G0U5 840 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 LIMS2Q7Z4I7 341 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 GPD1LQ8N335 351 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 NETO1Q8TDF5 533 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 MYLPFQ96A32 169 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 CYP2S1Q96SQ9 504 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 TRPC7Q9HCX4 862 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 CRTAC1Q9NQ79 661 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 INTS13Q9NVM9 706 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 PCDHB13Q9Y5F0 798 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 WNT6Q9Y6F9 365 aa15.74■□□□□ 0.11
IRF3-223ENST00000599223 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
IRF3-223ENST00000599223 TMEM191BP0C7N4 346 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 LMO2P25791 158 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 GJA4P35212 333 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 NASPP49321 788 aaPredicted RBP15.73■□□□□ 0.11
IRF3-223ENST00000599223 RPL10AP62906 217 aaKnown RBP15.73■□□□□ 0.11
IRF3-223ENST00000599223 RBP5P82980 135 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 GRSF1Q12849 480 aaKnown RBP eCLIP15.73■□□□□ 0.11
IRF3-223ENST00000599223 FAM171BQ6P995 826 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 CEP68Q76N32 757 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 KBTBD6Q86V97 674 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 SPATA2LQ8IUW3 424 aaPredicted RBP15.73■□□□□ 0.11
IRF3-223ENST00000599223 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 CACTINQ8WUQ7 758 aaKnown RBP15.73■□□□□ 0.11
IRF3-223ENST00000599223 GAB3Q8WWW8 586 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 SNX21Q969T3 373 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 HHIPQ96QV1 700 aa15.73■□□□□ 0.11
IRF3-223ENST00000599223 SYT15Q9BQS2 421 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms