RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 CDX2Q99626 313 aaPredicted RBP11.31□□□□□ -0.6
SMG9-207ENST00000598860 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 ZMYM5Q9UJ78 669 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 PCDHA11Q9Y5I1 949 aa11.31□□□□□ -0.6
SMG9-207ENST00000598860 LRRIQ4A6NIV6 560 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 CCDC169A6NNP5 214 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 BIN1O00499 593 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 PSMA7O14818 248 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 UBOX5O94941 541 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 GCNT3O95395 438 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 CST3P01034 146 aaPredicted RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 F13BP05160 661 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 NPTX2P47972 431 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 CAPSQ13938 189 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 BMT2Q1RMZ1 405 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 C2orf27AQ580R0 203 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 LRSAM1Q6UWE0 723 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 ZNF720Q7Z2F6 126 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 SRGAP1Q7Z6B7 1085 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 RHPN2Q8IUC4 686 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 TMEM192Q8IY95 271 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 KIAA0319LQ8IZA0 1049 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 GUF1Q8N442 669 aaKnown RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 DBF4BQ8NFT6 615 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 CYB5D2Q8WUJ1 264 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 PRPF31Q8WWY3 499 aaKnown RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 SEPT8Q92599 483 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 ZNF669Q96BR6 464 aaPredicted RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 DHRS1Q96LJ7 313 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 SCLT1Q96NL6 688 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 FIZ1Q96SL8 496 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 FUCA2Q9BTY2 467 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
SMG9-207ENST00000598860 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 TMEM206Q9H813 350 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 ARHGAP28Q9P2N2 729 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 EXOC7Q9UPT5 735 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 TRIP11Q15643 1979 aa11.3□□□□□ -0.6
SMG9-207ENST00000598860 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 ESYT3A0FGR9 886 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 SUSD5O60279 629 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 GPC3P51654 580 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 PTENP60484 403 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 WDR5P61964 334 aaKnown RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 GTF2BQ00403 316 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 STRN3Q13033 797 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 STK4Q13043 487 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 DRP2Q13474 957 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 BBS9Q3SYG4 887 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 PLEKHG4Q58EX7 1191 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 RNF149Q8NC42 400 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 BAHD1Q8TBE0 780 aaPredicted RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 DNAJB3Q8WWF6 145 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 MYLIPQ8WY64 445 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 GATA6Q92908 595 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 DHTKD1Q96HY7 919 aaPredicted RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 NLRP4Q96MN2 994 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 SLC39A2Q9NP94 309 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 GDAQ9Y2T3 454 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 YBX2Q9Y2T7 364 aaKnown RBP11.29□□□□□ -0.6
SMG9-207ENST00000598860 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 MICAL3Q7RTP6 2002 aa11.29□□□□□ -0.6
SMG9-207ENST00000598860 ANK1P16157 1881 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 PDCD11Q14690 1871 aaKnown RBP11.28□□□□□ -0.6
SMG9-207ENST00000598860 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 K7ERI5 159 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 SLC16A4O15374 487 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 CHRNA1P02708 482 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 VTNP04004 478 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 MYOGP15173 224 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 NMT1P30419 496 aaKnown RBP11.28□□□□□ -0.6
SMG9-207ENST00000598860 GBP1P32455 592 aa11.28□□□□□ -0.6
SMG9-207ENST00000598860 NLRP11P59045 1033 aaKnown RBP11.28□□□□□ -0.6
SMG9-207ENST00000598860 SNRPFP62306 86 aaKnown RBP11.28□□□□□ -0.6
SMG9-207ENST00000598860 MRPS6P82932 125 aaKnown RBP11.28□□□□□ -0.6
SMG9-207ENST00000598860 SQSTM1Q13501 440 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms