RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MLKLQ8NB16 471 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 B3GALNT2Q8NCR0 500 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 FBXL13Q8NEE6 735 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 SHKBP1Q8TBC3 707 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 GPR152Q8TDT2 470 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 NXPE3Q969Y0 559 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 SLC35C1Q96A29 364 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 PCED1BQ96HM7 432 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 SRRTQ9BXP5 876 aaKnown RBP14.78□□□□□ -0.04
UPF1-205ENST00000598209 BCO2Q9BYV7 579 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 RAB20Q9NX57 234 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 GDE1Q9NZC3 331 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 RWDD2AQ9UIY3 292 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 NUMBLQ9Y6R0 609 aa14.78□□□□□ -0.04
UPF1-205ENST00000598209 NUP210Q8TEM1 1887 aaPredicted RBP14.78□□□□□ -0.04
UPF1-205ENST00000598209 ANAPC1Q9H1A4 1944 aa14.77□□□□□ -0.04
UPF1-205ENST00000598209 A0A1W2PRU2 124 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 GPR37L1O60883 481 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 BDNFP23560 247 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 MAGEA11P43364 429 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 SIGLEC14Q08ET2 396 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 TEAD2Q15562 447 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 DDR2Q16832 855 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 TMEM31Q5JXX7 168 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 PARM1Q6UWI2 310 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 TRIM67Q6ZTA4 783 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 MTSS1LQ765P7 747 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 SCN4BQ8IWT1 228 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 STKLD1Q8NE28 680 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 FGF14Q92915 247 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 TNIP3Q96KP6 325 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 NIF3L1Q9GZT8 377 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 CYP3A43Q9HB55 503 aa14.77□□□□□ -0.05
UPF1-205ENST00000598209 FGFR1OPO95684 399 aaKnown RBP14.76□□□□□ -0.05
UPF1-205ENST00000598209 FGF19O95750 216 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 GNA14O95837 355 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 CSH1P0DML2 217 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 CSH2P0DML3 217 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 GABRR2P28476 465 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 FMO5P49326 533 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 NDST1P52848 882 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 NLRP12P59046 1061 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 DPCR1Q3MIW9 517 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 WDR44Q5JSH3 913 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 VSTM1Q6UX27 236 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 GAREM2Q75VX8 874 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 ACOT1Q86TX2 421 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 SLC44A3Q8N4M1 653 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 KXD1Q9BQD3 176 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 RPP25Q9BUL9 199 aaKnown RBP14.76□□□□□ -0.05
UPF1-205ENST00000598209 B3GNT5Q9BYG0 378 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 IL21Q9HBE4 155 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 HMGXB4Q9UGU5 601 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 MAGED2Q9UNF1 606 aaPredicted RBP14.76□□□□□ -0.05
UPF1-205ENST00000598209 DUSP12Q9UNI6 340 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 COQ4Q9Y3A0 265 aa14.76□□□□□ -0.05
UPF1-205ENST00000598209 TMEM221A6NGB7 291 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 SLC38A8A6NNN8 435 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 M0R296 226 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 CLDN5O00501 218 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 NARSO43776 548 aaKnown RBP14.75□□□□□ -0.05
UPF1-205ENST00000598209 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
UPF1-205ENST00000598209 CDC25CP30307 473 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 GRIK1P39086 918 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 MARSP56192 900 aaKnown RBP14.75□□□□□ -0.05
UPF1-205ENST00000598209 INCA1Q0VD86 236 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 ORC1Q13415 861 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 UNC93AQ86WB7 457 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 TATDN2Q93075 761 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 FAXDC2Q96IV6 333 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 ZSWIM3Q96MP5 696 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 GCNAQ96QF7 691 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 MED15Q96RN5 788 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 LRFN3Q9BTN0 628 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 ZNF518BQ9C0D4 1074 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 GPR88Q9GZN0 384 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 ELOVL4Q9GZR5 314 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 SLITRK6Q9H5Y7 841 aa14.75□□□□□ -0.05
UPF1-205ENST00000598209 ATP8B3O60423 1300 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 PRR33A8MZF0 331 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 TRIM66O15016 1216 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 NOL4O94818 638 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 MBD3O95983 291 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 CD58P19256 250 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 ANXA13P27216 316 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 CYP4F8P98187 520 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 ARHGAP15Q53QZ3 475 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 FAM78AQ5JUQ0 283 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 STXBP5Q5T5C0 1151 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 TANGO2Q6ICL3 276 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 CRYBG2Q8N1P7 616 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 ZSCAN18Q8TBC5 510 aaPredicted RBP14.74□□□□□ -0.05
UPF1-205ENST00000598209 ASIC4Q96FT7 647 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 SPATA17Q96L03 361 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 ASB16Q96NS5 453 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 TWNKQ96RR1 684 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 MED10Q9BTT4 135 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms