RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 PDE11AQ9HCR9 933 aa16.3■□□□□ 0.2
PRKD2-210ENST00000597641 TDP1Q9NUW8 608 aa16.3■□□□□ 0.2
PRKD2-210ENST00000597641 DDX43Q9NXZ2 648 aaKnown RBP16.3■□□□□ 0.2
PRKD2-210ENST00000597641 AKAP13Q12802 2813 aa16.3■□□□□ 0.2
PRKD2-210ENST00000597641 MYH10P35580 1976 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 NOL4O94818 638 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 IL18RAPO95256 599 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 BMP15O95972 392 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 GJA4P35212 333 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 AVPR1AP37288 418 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 ZXDBP98169 803 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
PRKD2-210ENST00000597641 GAB3Q8WWW8 586 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 HVCN1Q96D96 273 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 HHIPQ96QV1 700 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 THG1LQ9NWX6 298 aaKnown RBP16.29■□□□□ 0.2
PRKD2-210ENST00000597641 NME7Q9Y5B8 376 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 CEP192Q8TEP8 1941 aa16.29■□□□□ 0.2
PRKD2-210ENST00000597641 CACNA1EQ15878 2313 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 GABRDO14764 452 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 TM4SF5O14894 197 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 DCLK1O15075 740 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 RPP40O75818 363 aaKnown RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 PRPF6O94906 941 aaKnown RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 GCNT3O95395 438 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 TSPY1Q01534 308 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 BFSP1Q12934 665 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 RESTQ13127 1097 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 ZNF77Q15935 545 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 SOWAHAQ2M3V2 549 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 NT5DC4Q86YG4 428 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 CSGALNACT2Q8N6G5 542 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 OR5B17Q8NGF7 314 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 HPS3Q969F9 1004 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 ZNF560Q96MR9 790 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 ACCSQ96QU6 501 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 ACBD6Q9BR61 282 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 MTMR12Q9C0I1 747 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 GCNT4Q9P109 453 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 STK17AQ9UEE5 414 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 SNX9Q9Y5X1 595 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 WNT6Q9Y6F9 365 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 IGF2RP11717 2491 aa16.28■□□□□ 0.2
PRKD2-210ENST00000597641 TNRC6BQ9UPQ9 1833 aaKnown RBP16.28■□□□□ 0.2
PRKD2-210ENST00000597641 PCNX2A6NKB5 2137 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 FRMD3A2A2Y4 597 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 EPN2O95208 641 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 CSH1P0DML2 217 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 CSH2P0DML3 217 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 LMO2P25791 158 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 DDX6P26196 483 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKD2-210ENST00000597641 HOXD13P35453 343 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 GRSF1Q12849 480 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKD2-210ENST00000597641 USP4Q13107 963 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 CUL4AQ13619 759 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 ZNF268Q14587 947 aaPredicted RBP16.27■□□□□ 0.2
PRKD2-210ENST00000597641 MTF1Q14872 753 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 POSTNQ15063 836 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 EML3Q32P44 896 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 RRAGBQ5VZM2 374 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 TCEAL6Q6IPX3 200 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 TTC16Q8NEE8 873 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 KBTBD7Q8WVZ9 684 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 MRPS31Q92665 395 aaKnown RBP16.27■□□□□ 0.2
PRKD2-210ENST00000597641 TCEAL3Q969E4 200 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 MYRFLQ96LU7 910 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 LINC00597Q9H2U6 94 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 ECT2Q9H8V3 914 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 TRPC7Q9HCX4 862 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.2
PRKD2-210ENST00000597641 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.27■□□□□ 0.2
PRKD2-210ENST00000597641 HUS1O60921 280 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 GARTP22102 1010 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 ABCD1P33897 745 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 PNPLA4P41247 253 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 USP46P62068 366 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 PSMC1P62191 440 aaKnown RBP16.26■□□□□ 0.19
PRKD2-210ENST00000597641 NFE2Q16621 373 aaPredicted RBP16.26■□□□□ 0.19
PRKD2-210ENST00000597641 GAB4Q2WGN9 574 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 PLA2G2CQ5R387 149 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 SV2BQ7L1I2 683 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 ADGRF2Q8IZF7 708 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 ARL14EPQ8N8R7 260 aaPredicted RBP16.26■□□□□ 0.19
PRKD2-210ENST00000597641 RPLP0P6Q8NHW5 317 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 NOC3LQ8WTT2 800 aaKnown RBP16.26■□□□□ 0.19
PRKD2-210ENST00000597641 TRMT2BQ96GJ1 504 aaKnown RBP16.26■□□□□ 0.19
PRKD2-210ENST00000597641 USP28Q96RU2 1077 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 P2RY13Q9BPV8 354 aa16.26■□□□□ 0.19
PRKD2-210ENST00000597641 KIF9Q9HAQ2 790 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms