RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 MCRS1Q96EZ8 462 aa11.82□□□□□ -0.52
LIG1-211ENST00000596457 MYADMQ96S97 322 aa11.82□□□□□ -0.52
LIG1-211ENST00000596457 NIF3L1Q9GZT8 377 aa11.82□□□□□ -0.52
LIG1-211ENST00000596457 KCNH6Q9H252 994 aa11.82□□□□□ -0.52
LIG1-211ENST00000596457 ASAH2Q9NR71 780 aa11.82□□□□□ -0.52
LIG1-211ENST00000596457 ANO10Q9NW15 660 aa11.82□□□□□ -0.52
LIG1-211ENST00000596457 MRPS23Q9Y3D9 190 aaKnown RBP11.82□□□□□ -0.52
LIG1-211ENST00000596457 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 CLDN5O00501 218 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 PTMSP20962 102 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 MCCD1P59942 119 aaPredicted RBP11.81□□□□□ -0.52
LIG1-211ENST00000596457 TYRO3Q06418 890 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
LIG1-211ENST00000596457 SLC5A9Q2M3M2 681 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 FAM171BQ6P995 826 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 DNAJB7Q7Z6W7 309 aaPredicted RBP11.81□□□□□ -0.52
LIG1-211ENST00000596457 ITIH5Q86UX2 942 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 B3GALNT2Q8NCR0 500 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 MYCBPAPQ8TBZ2 947 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 EDAQ92838 391 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 PCED1BQ96HM7 432 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 PKMYT1Q99640 499 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 B3GNT5Q9BYG0 378 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 BCO2Q9BYV7 579 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 THAP9Q9H5L6 903 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 SAMSN1Q9NSI8 373 aaKnown RBP11.81□□□□□ -0.52
LIG1-211ENST00000596457 HMGXB4Q9UGU5 601 aa11.81□□□□□ -0.52
LIG1-211ENST00000596457 ZNF197O14709 1029 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 ASGR2P07307 311 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 POU2F2P09086 479 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
LIG1-211ENST00000596457 CEBPBP17676 345 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 ATF6P18850 670 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
LIG1-211ENST00000596457 ANXA13P27216 316 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 ADORA2BP29275 332 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 MARSP56192 900 aaKnown RBP11.8□□□□□ -0.52
LIG1-211ENST00000596457 RPL10AP62906 217 aaKnown RBP11.8□□□□□ -0.52
LIG1-211ENST00000596457 IFRD2Q12894 506 aaPredicted RBP11.8□□□□□ -0.52
LIG1-211ENST00000596457 MTMR3Q13615 1198 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 BMP8AQ7Z5Y6 402 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 IRF2BP1Q8IU81 584 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 EHBP1Q8NDI1 1231 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 ARID3AQ99856 593 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 CRACR2AQ9BSW2 395 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 CYP3A43Q9HB55 503 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 ZNF334Q9HCZ1 680 aaPredicted RBP11.8□□□□□ -0.52
LIG1-211ENST00000596457 FAM49BQ9NUQ9 324 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
LIG1-211ENST00000596457 HSFX1Q9UBD0 423 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 MUTYHQ9UIF7 546 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 USTQ9Y2C2 406 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 COQ4Q9Y3A0 265 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 ASB3Q9Y575 518 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 PTPRDP23468 1912 aa11.8□□□□□ -0.52
LIG1-211ENST00000596457 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 A0A1W2PRU2 124 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 SLC38A8A6NNN8 435 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 KCNJ18B7U540 433 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 PAPLNO95428 1278 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 LAMP2P13473 410 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 CCDC130P13994 396 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 GABRR2P28476 465 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 CCR2P41597 374 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 CUL2Q13617 745 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 KCNJ12Q14500 433 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 TEAD2Q15562 447 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 CT47A1Q5JQC4 288 aaPredicted RBP11.79□□□□□ -0.52
LIG1-211ENST00000596457 RRAGAQ7L523 313 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 C12orf29Q8N999 325 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 ENOX1Q8TC92 643 aaKnown RBP11.79□□□□□ -0.52
LIG1-211ENST00000596457 RSAD2Q8WXG1 361 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 FGF13Q92913 245 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 PSMG2Q969U7 264 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 FUBP3Q96I24 572 aaKnown RBP eCLIP11.79□□□□□ -0.52
LIG1-211ENST00000596457 HEXIM2Q96MH2 286 aaKnown RBP11.79□□□□□ -0.52
LIG1-211ENST00000596457 TUBGCP2Q9BSJ2 902 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 ZNF518BQ9C0D4 1074 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 DNAI2Q9GZS0 605 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 INTS2Q9H0H0 1204 aaKnown RBP11.79□□□□□ -0.52
LIG1-211ENST00000596457 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 SLITRK6Q9H5Y7 841 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 ABCB6Q9NP58 842 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 CISHQ9NSE2 258 aa11.79□□□□□ -0.52
LIG1-211ENST00000596457 CDH7Q9ULB5 785 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms