RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-205	ENST00000595797	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PAF1-205	ENST00000595797	LHX6	Q9UPM6	363 aa		13.75	□□□□□ -0.21
PAF1-205	ENST00000595797	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.75	□□□□□ -0.21
PAF1-205	ENST00000595797	ZFHX4	Q86UP3	3567 aa		13.75	□□□□□ -0.21
PAF1-205	ENST00000595797	CEP192	Q8TEP8	1941 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	ANAPC1	Q9H1A4	1944 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	FRY	Q5TBA9	3013 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	OTOL1	A6NHN0	477 aa	Predicted RBP	13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	TBCA	O75347	108 aa	Known RBP	13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	DPP6	P42658	865 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	MAPK8	P45983	427 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	NCKAP1L	P55160	1127 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	C2orf27A	Q580R0	203 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	TRIM61	Q5EBN2	209 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	WSCD1	Q658N2	575 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	ADAL	Q6DHV7	355 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	KCNK18	Q7Z418	384 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	HDDC3	Q8N4P3	179 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	ASB7	Q9H672	318 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	DPP3	Q9NY33	737 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	ODF2L	Q9ULJ1	636 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	TBX20	Q9UMR3	447 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	LIMCH1	Q9UPQ0	1083 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	KIF3A	Q9Y496	699 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	PCDHB6	Q9Y5E3	794 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	WNT6	Q9Y6F9	365 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	GON4L	Q3T8J9	2241 aa		13.74	□□□□□ -0.21
PAF1-205	ENST00000595797	SRRM3	A6NNA2	597 aa	Predicted RBP	13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	PIR	O00625	290 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	F11	P03951	625 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	PNPLA4	P41247	253 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	MYL7	Q01449	175 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	BYSL	Q13895	437 aa	Known RBP	13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	DHX8	Q14562	1220 aa	Known RBP	13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	MCTP1	Q6DN14	999 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	SLFN12L	Q6IEE8	588 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	PGBD3	Q8N328	593 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	C4orf32	Q8N8J7	132 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	CALML4	Q96GE6	196 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	CNOT6L	Q96LI5	555 aa	Known RBP	13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	HAPLN2	Q9GZV7	340 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	PARVG	Q9HBI0	331 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	POLM	Q9NP87	494 aa	Predicted RBP	13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	C2CD2	Q9Y426	696 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	PCNX2	A6NKB5	2137 aa		13.73	□□□□□ -0.21
PAF1-205	ENST00000595797	ADAMTS9	Q9P2N4	1935 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	LAMA1	P25391	3075 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	VWA3A	A6NCI4	1184 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	MYMK	A6NI61	221 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	KPNA7	A9QM74	516 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	PATE3	B3GLJ2	98 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	HUS1	O60921	280 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	CFI	P05156	583 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	ACOT2	P49753	483 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	IRX4	P78413	519 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	ARMCX6	Q7L4S7	300 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	GPBP1	Q86WP2	473 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	SCN4B	Q8IWT1	228 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	CCDC33	Q8N5R6	958 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	STKLD1	Q8NE28	680 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	WHAMM	Q8TF30	809 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	CPSF3	Q9UKF6	684 aa	Known RBP	13.72	□□□□□ -0.21
PAF1-205	ENST00000595797	NEUROG3	Q9Y4Z2	214 aa		13.72	□□□□□ -0.21
PAF1-205	ENST00000595797		A0A0B4J269	797 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	ANO9	A1A5B4	782 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	ZBTB24	O43167	697 aa	Predicted RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	HYAL3	O43820	417 aa	Predicted RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	TRAK2	O60296	914 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	PIGR	P01833	764 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	HMGA1	P17096	107 aa	Known RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	BCKDHB	P21953	392 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	GPR15	P49685	360 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	SLC12A3	P55017	1021 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	SIM1	P81133	766 aa	Predicted RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	USP4	Q13107	963 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	ZNF77	Q15935	545 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	DDR2	Q16832	855 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	SDHAF4	Q5VUM1	108 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	NAIF1	Q69YI7	327 aa	Predicted RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	TMEM150A	Q86TG1	271 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	LRRTM3	Q86VH5	581 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	EFCAB13	Q8IY85	973 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	SH3RF2	Q8TEC5	729 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	REEP2	Q9BRK0	252 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	GTPBP2	Q9BX10	602 aa	Known RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	EVL	Q9UI08	416 aa	Predicted RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	AGO2	Q9UKV8	859 aa	Known RBP	13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	MMP17	Q9ULZ9	603 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	ZFYVE26	Q68DK2	2539 aa		13.71	□□□□□ -0.21
PAF1-205	ENST00000595797	FASN	P49327	2511 aa	Known RBP	13.7	□□□□□ -0.22
PAF1-205	ENST00000595797	PTPRD	P23468	1912 aa		13.7	□□□□□ -0.22
PAF1-205	ENST00000595797	MYO18A	Q92614	2054 aa	Known RBP	13.7	□□□□□ -0.22
PAF1-205	ENST00000595797		H0Y626	953 aa		13.7	□□□□□ -0.22
PAF1-205	ENST00000595797	CDX4	O14627	284 aa	Predicted RBP	13.7	□□□□□ -0.22
PAF1-205	ENST00000595797	IL18RAP	O95256	599 aa		13.7	□□□□□ -0.22
PAF1-205	ENST00000595797	TRIM16	O95361	564 aa		13.7	□□□□□ -0.22
PAF1-205	ENST00000595797	TOP3B	O95985	862 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms