RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 EXOC4Q96A65 974 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 CRELD1Q96HD1 420 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 TMX3Q96JJ7 454 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 KIF9Q9HAQ2 790 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 ZDHHC4Q9NPG8 344 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 PILRBQ9UKJ0 227 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 MMP17Q9ULZ9 603 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 KIAA1024Q9UPX6 916 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 ADAMTS9Q9P2N4 1935 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 PI4KAP42356 2102 aa14.87□□□□□ -0.03
SHKBP1-208ENST00000595726 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 SH3BP5O60239 455 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 OPHN1O60890 802 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 TOM1L1O75674 476 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 ODC1P11926 461 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 CCT6AP40227 531 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 OPRD1P41143 372 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 MESP2Q0VG99 397 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 MAPK7Q13164 816 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 TRIP6Q15654 476 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 EMC10Q5UCC4 262 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 LYSMD4Q5XG99 296 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 CCNI2Q6ZMN8 369 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 EFCAB13Q8IY85 973 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 MINDY1Q8N5J2 469 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 ERMNQ8TAM6 284 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 MRPS31Q92665 395 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 FOXP1Q9H334 677 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 PLEKHA5Q9HAU0 1116 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 TRPC7Q9HCX4 862 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 ABI2Q9NYB9 513 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 UBQLN1Q9UMX0 589 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 SLC6A14Q9UN76 642 aa14.86□□□□□ -0.03
SHKBP1-208ENST00000595726 SGK1O00141 431 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 CLDN3O15551 220 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 CLTAP09496 248 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 CYP3A5P20815 502 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 DDX6P26196 483 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 MATR3P43243 847 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ZNF268Q14587 947 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ZNF174Q15697 407 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ZNF77Q15935 545 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 MAP7D1Q3KQU3 841 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ZC2HC1CQ53FD0 456 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ALLCQ8N6M5 410 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 TXNDC5Q8NBS9 432 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 GLIS3Q8NEA6 775 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ATP2A3Q93084 1043 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 RUSC1Q9BVN2 902 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 DDX19AQ9NUU7 478 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 TMLHEQ9NVH6 421 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ZMYM5Q9UJ78 669 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 RBM19Q9Y4C8 960 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 KIAA1549LQ6ZVL6 1849 aa14.85□□□□□ -0.03
SHKBP1-208ENST00000595726 ZNF638Q14966 1978 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 URB1O60287 2271 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 E9PMD0 336 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 TADA3O75528 432 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 ALDH1A2O94788 518 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 KLF8O95600 359 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 FAM160A1Q05DH4 1040 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 MCL1Q07820 350 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 DUOXA1Q1HG43 343 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 GAB4Q2WGN9 574 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 MARCH9Q86YJ5 346 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 LRRC15Q8TF66 581 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 HMGB4Q8WW32 186 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 ADAMTS14Q8WXS8 1223 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 SPACA7Q96KW9 195 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 BACH2Q9BYV9 841 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 CAPN10Q9HC96 672 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 CACNA2D2Q9NY47 1150 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 BCCIPQ9P287 314 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 PTPRDP23468 1912 aa14.84□□□□□ -0.03
SHKBP1-208ENST00000595726 CYP11A1P05108 521 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 SERPINF2P08697 491 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 OR52Z1P0C646 297 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 FTH1P19P0C7X4 201 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 TIE1P35590 1138 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 SLC6A11P48066 632 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 PPP2R3AQ06190 1150 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 RAD51AP2Q09MP3 1159 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 STRN3Q13033 797 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 NR1H3Q13133 447 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 GNL2Q13823 731 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 NBR1Q14596 966 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 ENOX2Q16206 610 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 DDR2Q16832 855 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 SPATA1Q5VX52 437 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 C9orf57Q5W0N0 161 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 SLCO6A1Q86UG4 719 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 PGBD3Q8N328 593 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 ARL14EPQ8N8R7 260 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 IL17RCQ8NAC3 791 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 SH3RF2Q8TEC5 729 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 WHAMMQ8TF30 809 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 PI4K2AQ9BTU6 479 aa14.83□□□□□ -0.04
SHKBP1-208ENST00000595726 PLXNB3Q9ULL4 1909 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms