RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 TSG101Q99816 390 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 KXD1Q9BQD3 176 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 PLA2G2FQ9BZM2 168 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 MMRN2Q9H8L6 949 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 TMEM8AQ9HCN3 771 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 LMBRD1Q9NUN5 540 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 TMEM30AQ9NV96 361 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 HMGXB4Q9UGU5 601 aa11.74□□□□□ -0.53
SHKBP1-206ENST00000595523 VPS13AQ96RL7 3174 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 DMDP11532 3685 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 SRFP11831 508 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 GABRR2P28476 465 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 GTF2H1P32780 548 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 MAGEA11P43364 429 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 STIM1Q13586 685 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 CBWD6Q4V339 395 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 MDH1BQ5I0G3 518 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 CBWD3Q5JTY5 395 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 CBWD5Q5RIA9 395 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 IER5LQ5T953 404 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 TANGO2Q6ICL3 276 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 MTSS1LQ765P7 747 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 ITIH5Q86UX2 942 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 SPATA2LQ8IUW3 424 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 MYCBPAPQ8TBZ2 947 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 SLC35C1Q96A29 364 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 ASB16Q96NS5 453 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 MED15Q96RN5 788 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 BCO2Q9BYV7 579 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 CTNND2Q9UQB3 1225 aa11.73□□□□□ -0.53
SHKBP1-206ENST00000595523 MYO15AQ9UKN7 3530 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 KRBA1A5PL33 1030 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 A8MXQ7 604 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 ECI2O75521 394 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 TADA3O75528 432 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 NOL4O94818 638 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 F11P03951 625 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 CFHP08603 1231 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 COL9A1P20849 921 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 BDNFP23560 247 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 PPP1R2P41236 205 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 MXI1P50539 228 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 STX17P56962 302 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 NOP14P78316 857 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 GPC5P78333 572 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 CYP4F8P98187 520 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 ORC1Q13415 861 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 VEPH1Q14D04 833 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 KRT39Q6A163 491 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 FOXR2Q6PJQ5 311 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 C4orf50Q6ZRC1 276 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 B3GALNT2Q8NCR0 500 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 PBXIP1Q96AQ6 731 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 RSPRY1Q96DX4 576 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 TWNKQ96RR1 684 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 B3GNT5Q9BYG0 378 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 ZNF518BQ9C0D4 1074 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 TRPV4Q9HBA0 871 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 MAGEC2Q9UBF1 373 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 CACNA1IQ9P0X4 2223 aa11.72□□□□□ -0.53
SHKBP1-206ENST00000595523 SLC38A8A6NNN8 435 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 CLDN5O00501 218 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 CLSTN1O94985 981 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 NPR3P17342 541 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 VIPR2P41587 438 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 NDST1P52848 882 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 VCPP55072 806 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 NLRP12P59046 1061 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 RPL10AP62906 217 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 INCA1Q0VD86 236 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 PAK1Q13153 545 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 VITQ6UXI7 678 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 PAQR9Q6ZVX9 377 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 FILIP1Q7Z7B0 1213 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 FBXL6Q8N531 539 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 WHAMMQ8TF30 809 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 SMARCD2Q92925 531 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 ELSPBP1Q96BH3 223 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 TRMT2BQ96GJ1 504 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
SHKBP1-206ENST00000595523 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms