RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 LHX1P48742 406 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 RBP5P82980 135 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 ZNF268Q14587 947 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-203ENST00000593641 PDGFRLQ15198 375 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 TMEM196Q5HYL7 178 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 FAM173BQ6P4H8 233 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 SPATA2LQ8IUW3 424 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-203ENST00000593641 ADGRF2Q8IZF7 708 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 FAM160A2Q8N612 972 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-203ENST00000593641 TOP6BLQ8N6T0 577 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 EXOC4Q96A65 974 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 TRMT2BQ96GJ1 504 aaKnown RBP24.32■■□□□ 1.48
SSBP4-203ENST00000593641 MTMR12Q9C0I1 747 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 PCIF1Q9H4Z3 704 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 GDAP2Q9NXN4 497 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 SLC8A2Q9UPR5 921 aa24.32■■□□□ 1.48
SSBP4-203ENST00000593641 EPG5Q9HCE0 2579 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 TRDMT1O14717 391 aaKnown RBP24.31■■□□□ 1.48
SSBP4-203ENST00000593641 NOL4O94818 638 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 SYT1P21579 422 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 FSTL4Q6MZW2 842 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 GPD1LQ8N335 351 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 ANKRD36BP1Q96IX9 119 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 PANK2Q9BZ23 570 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 PDE11AQ9HCR9 933 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 TRPC7Q9HCX4 862 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 GTF3C4Q9UKN8 822 aa24.31■■□□□ 1.48
SSBP4-203ENST00000593641 SLC30A4O14863 429 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 KIAA0391O15091 583 aaKnown RBP24.3■■□□□ 1.48
SSBP4-203ENST00000593641 ARSAP15289 507 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 FAM160A1Q05DH4 1040 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 MYO1EQ12965 1108 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 MTF1Q14872 753 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 CFAP221Q4G0U5 840 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 STXBP4Q6ZWJ1 553 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 CCDC65Q8IXS2 484 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 TTC16Q8NEE8 873 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 CXorf38Q8TB03 319 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 FUBP3Q96I24 572 aaKnown RBP eCLIP24.3■■□□□ 1.48
SSBP4-203ENST00000593641 FAM84AQ96KN4 292 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 MYRFLQ96LU7 910 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 PKMYT1Q99640 499 aa24.3■■□□□ 1.48
SSBP4-203ENST00000593641 MORC2Q9Y6X9 1032 aaPredicted RBP24.3■■□□□ 1.48
SSBP4-203ENST00000593641 EML5Q05BV3 1969 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 TRAV19A0A0A6YYK7 116 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 CCDC163A0A0D9SF12 145 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 OTOL1A6NHN0 477 aaPredicted RBP24.29■■□□□ 1.48
SSBP4-203ENST00000593641 TADA3O75528 432 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 PRPF6O94906 941 aaKnown RBP24.29■■□□□ 1.48
SSBP4-203ENST00000593641 CKMP06732 381 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 PKN3Q6P5Z2 889 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 OSTM1Q86WC4 334 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 CPA6Q8N4T0 437 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 FSIP1Q8NA03 581 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 USP28Q96RU2 1077 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 FGFBP2Q9BYJ0 223 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 SIX4Q9UIU6 781 aa24.29■■□□□ 1.48
SSBP4-203ENST00000593641 HELZP42694 1942 aaKnown RBP24.29■■□□□ 1.48
SSBP4-203ENST00000593641 PTPRDP23468 1912 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 RNF40O75150 1001 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 RPP40O75818 363 aaKnown RBP24.28■■□□□ 1.48
SSBP4-203ENST00000593641 TNNC2P02585 160 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 USP17L7P0C7H9 530 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 CCDC192P0DO97 292 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 DRD1P21728 446 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 HOXC13P31276 330 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 PXNP49023 591 aaPredicted RBP24.28■■□□□ 1.48
SSBP4-203ENST00000593641 SLC39A14Q15043 492 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 LMBRD2Q68DH5 695 aaPredicted RBP24.28■■□□□ 1.48
SSBP4-203ENST00000593641 C4orf50Q6ZRC1 276 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 SCN4BQ8IWT1 228 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 PDILTQ8N807 584 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 RIN3Q8TB24 985 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 GAB3Q8WWW8 586 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 CHFRQ96EP1 664 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 MYO16Q9Y6X6 1858 aa24.28■■□□□ 1.48
SSBP4-203ENST00000593641 A0A087X0B3 334 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 GABRDO14764 452 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 EGFP01133 1207 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 IFNAR2P48551 515 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 SURF1Q15526 300 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 SOWAHAQ2M3V2 549 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 FBXO43Q4G163 708 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 SCARA3Q6AZY7 606 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 DPH6Q7L8W6 267 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 CACNA2D4Q7Z3S7 1137 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 OSCP1Q8WVF1 389 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 ATP2A3Q93084 1043 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 P2RY13Q9BPV8 354 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 LRRC27Q9C0I9 530 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 INTS13Q9NVM9 706 aa24.27■■□□□ 1.48
SSBP4-203ENST00000593641 DUS2Q9NX74 493 aaKnown RBP24.27■■□□□ 1.48
SSBP4-203ENST00000593641 ZNF233A6NK53 670 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 HCRTO43612 131 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 GJA4P35212 333 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 KCNB1Q14721 858 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 ZNF77Q15935 545 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 CCDC142Q17RM4 750 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 HPDLQ96IR7 371 aa24.26■■□□□ 1.47
SSBP4-203ENST00000593641 LOXL4Q96JB6 756 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms