RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CC2D1AQ6P1N0 951 aaPredicted RBP17.57■□□□□ 0.4
LIG1-205ENST00000593425 SV2BQ7L1I2 683 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 KBTBD6Q86V97 674 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 LRRC52Q8N7C0 313 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 SLC22A12Q96S37 553 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 MTMR12Q9C0I1 747 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 ABCB6Q9NP58 842 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 OLFML3Q9NRN5 406 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 RXFP3Q9NSD7 469 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 SIX4Q9UIU6 781 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 SLC8A2Q9UPR5 921 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 SRPRBQ9Y5M8 271 aaKnown RBP17.57■□□□□ 0.4
LIG1-205ENST00000593425 SNX9Q9Y5X1 595 aa17.57■□□□□ 0.4
LIG1-205ENST00000593425 A0A087X0B3 334 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 FRMD3A2A2Y4 597 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 SOBPA7XYQ1 873 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 KRT37O76014 449 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 EPN2O95208 641 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 LDHAP00338 332 aaKnown RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 KRT19P08727 400 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 IDEP14735 1019 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 GJA4P35212 333 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 GALK1P51570 392 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 USP4Q13107 963 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 RESTQ13127 1097 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 PDGFRLQ15198 375 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 ZNF77Q15935 545 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 LMBRD2Q68DH5 695 aaPredicted RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 ADGRF2Q8IZF7 708 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 SYCP3Q8IZU3 236 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 TMEM86AQ8N2M4 240 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 CSGALNACT2Q8N6G5 542 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 NOC3LQ8WTT2 800 aaKnown RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 CACTINQ8WUQ7 758 aaKnown RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 EZH1Q92800 747 aaPredicted RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 TRMT2BQ96GJ1 504 aaKnown RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 HHIPQ96QV1 700 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 CYP2S1Q96SQ9 504 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 PCIF1Q9H4Z3 704 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 UPF2Q9HAU5 1272 aaKnown RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 PDE11AQ9HCR9 933 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 TRPC7Q9HCX4 862 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 UXTQ9UBK9 157 aaPredicted RBP17.56■□□□□ 0.4
LIG1-205ENST00000593425 ITGA11Q9UKX5 1188 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 PTPRDP23468 1912 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 SPAG17Q6Q759 2223 aa17.56■□□□□ 0.4
LIG1-205ENST00000593425 PTPRJQ12913 1337 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 CCDC163A0A0D9SF12 145 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 GABRDO14764 452 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 ATG13O75143 517 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 PRPF6O94906 941 aaKnown RBP17.55■□□□□ 0.4
LIG1-205ENST00000593425 CCDC192P0DO97 292 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 RAP1GAPP47736 663 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
LIG1-205ENST00000593425 FAM160A1Q05DH4 1040 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 CUL4AQ13619 759 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 CFAP221Q4G0U5 840 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 AASDHQ4L235 1098 aaPredicted RBP17.55■□□□□ 0.4
LIG1-205ENST00000593425 CACNA2D4Q7Z3S7 1137 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 TTC16Q8NEE8 873 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 LOXL4Q96JB6 756 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 MYRFLQ96LU7 910 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 P2RY13Q9BPV8 354 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 ECT2Q9H8V3 914 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 DUS2Q9NX74 493 aaKnown RBP17.55■□□□□ 0.4
LIG1-205ENST00000593425 PCDHB13Q9Y5F0 798 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 WNT6Q9Y6F9 365 aa17.55■□□□□ 0.4
LIG1-205ENST00000593425 C2orf78A6NCI8 922 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 FOXD2O60548 495 aaPredicted RBP17.54■□□□□ 0.4
LIG1-205ENST00000593425 ATP2C2O75185 946 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 CKMP06732 381 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 TMEM191BP0C7N4 346 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 DRD1P21728 446 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 KCNA4P22459 653 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 TXLNAP40222 546 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 RBP5P82980 135 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 AMPD2Q01433 879 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 SOWAHAQ2M3V2 549 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 SPATA2LQ8IUW3 424 aaPredicted RBP17.54■□□□□ 0.4
LIG1-205ENST00000593425 SCN4BQ8IWT1 228 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 GPD1LQ8N335 351 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 CPA6Q8N4T0 437 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 TOP6BLQ8N6T0 577 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 RPLP0P6Q8NHW5 317 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 SPATA18Q8TC71 538 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 OSCP1Q8WVF1 389 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 SMOC1Q9H4F8 434 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 TMEM206Q9H813 350 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 PANK4Q9NVE7 773 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 GCNT4Q9P109 453 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 SPTBN2O15020 2390 aa17.54■□□□□ 0.4
LIG1-205ENST00000593425 TRAV19A0A0A6YYK7 116 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 USP17L7P0C7H9 530 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 ZNF806P0C7X5 589 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 PCSK1P29120 753 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 STAT6P42226 847 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 IFNAR2P48551 515 aa17.53■□□□□ 0.4
LIG1-205ENST00000593425 LHX1P48742 406 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms