RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CYP26C1Q6V0L0 522 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 TMEM139Q8IV31 216 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 APPL2Q8NEU8 664 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 TAS1R2Q8TE23 839 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 BAP1Q92560 729 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 TAF4BQ92750 862 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 TTPALQ9BTX7 342 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 INTS2Q9H0H0 1204 aaKnown RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 ZBP1Q9H171 429 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 NGRNQ9NPE2 291 aaKnown RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
DDX39A-219ENST00000592927 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
DDX39A-219ENST00000592927 RNF225M0QZC1 329 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 M0QZQ0 153 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 C2CD2LO14523 706 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 HUS1O60921 280 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 CXCL14O95715 111 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 CTSAP10619 480 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 P4HA1P13674 534 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 HOXB8P17481 243 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 FGFR3P22607 806 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 POLR2FP61218 127 aaKnown RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 TNNC1P63316 161 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 DSG1Q02413 1049 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 GOLGA8FQ08AF8 430 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 GOLGA8DPQ0D2H9 430 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 WDR72Q3MJ13 1102 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 PLPP4Q5VZY2 271 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 LMO3Q8TAP4 145 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 KIAA1524Q8TCG1 905 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 B3GALT6Q96L58 329 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 SIX2Q9NPC8 291 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 KCND1Q9NSA2 647 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 RAB20Q9NX57 234 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 GDAP2Q9NXN4 497 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
DDX39A-219ENST00000592927 DSEQ9UL01 958 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
DDX39A-219ENST00000592927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-219ENST00000592927 STK25O00506 426 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 FSCN2O14926 492 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 EPHB6O15197 1021 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 CCP110O43303 1012 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
DDX39A-219ENST00000592927 TYMPP19971 482 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 ZC3H14Q6PJT7 736 aaKnown RBP12.68□□□□□ -0.38
DDX39A-219ENST00000592927 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 METTL23Q86XA0 190 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 CCDC170Q8IYT3 715 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 ZDHHC14Q8IZN3 488 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 SIX5Q8N196 739 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
DDX39A-219ENST00000592927 AUTS2Q8WXX7 1259 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 SEMA4DQ92854 862 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 SPAG5Q96R06 1193 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 MMS19Q96T76 1030 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.68□□□□□ -0.384e-7■■■■■ 27.7
DDX39A-219ENST00000592927 AIPL1Q9NZN9 384 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 PYCARDQ9ULZ3 195 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-219ENST00000592927 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
DDX39A-219ENST00000592927 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
DDX39A-219ENST00000592927 LRRC53A6NM62 1247 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 H7C4K7 107 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-219ENST00000592927 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 JAM2P57087 298 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 NOP14P78316 857 aaKnown RBP12.67□□□□□ -0.38
DDX39A-219ENST00000592927 CREMQ03060 361 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-219ENST00000592927 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 PSMD5Q16401 504 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
DDX39A-219ENST00000592927 WSCD1Q658N2 575 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 OVOS1Q6IE37 1185 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 SPOPLQ6IQ16 392 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 CES5AQ6NT32 575 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
DDX39A-219ENST00000592927 PRSS55Q6UWB4 352 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-219ENST00000592927 ANKS3Q6ZW76 656 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms