RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 CACNB2Q08289 660 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 MAPRE1Q15691 268 aaKnown RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 DNAJC9Q8WXX5 260 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 PNMA5Q96PV4 448 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 PI4K2AQ9BTU6 479 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 TLR10Q9BXR5 811 aa13.28□□□□□ -0.28
DNMT1-228ENST00000592705 MRPL9Q9BYD2 267 aaKnown RBP13.28□□□□□ -0.28
DNMT1-228ENST00000592705 NME3Q13232 169 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 GPAT2Q6NUI2 795 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 NSL1Q96IY1 281 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 IGFLR1Q9H665 355 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 EIF4E1BA6NMX2 242 aaKnown RBP13.27□□□□□ -0.28
DNMT1-228ENST00000592705 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.28
DNMT1-228ENST00000592705 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.28
DNMT1-228ENST00000592705 ZNF720Q7Z2F6 126 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 LRRC71Q8N4P6 559 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 SPATA18Q8TC71 538 aa13.27□□□□□ -0.28
DNMT1-228ENST00000592705 SLC15A5A6NIM6 579 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 CYP11B1P15538 503 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 POU5F1BQ06416 359 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 CUL2Q13617 745 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 RABGAP1LQ5R372 815 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 CREG2Q8IUH2 290 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 IFT43Q96FT9 208 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 SP110Q9HB58 689 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 OSGEPQ9NPF4 335 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 EEF1DP29692 281 aaKnown RBP13.27□□□□□ -0.29
DNMT1-228ENST00000592705 SESN2P58004 480 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-228ENST00000592705 FSCN1Q16658 493 aaKnown RBP13.27□□□□□ -0.29
DNMT1-228ENST00000592705 DAB2IPQ5VWQ8 1189 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 FBXO25Q8TCJ0 367 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 DTX3LQ8TDB6 740 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
DNMT1-228ENST00000592705 TBKBP1A7MCY6 615 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ALDH2P05091 517 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 LCP1P13796 627 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 DNERQ8NFT8 737 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 CXorf38Q8TB03 319 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 GMCL1Q96IK5 515 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 EML4Q9HC35 981 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 CD248Q9HCU0 757 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 INTS13Q9NVM9 706 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 FARP2O94887 1054 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 H3BRB1 525 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 SNX2O60749 519 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 XYLBO75191 536 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 EGFRP00533 1210 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 RBP3P10745 1247 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 KLRC2P26717 231 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ATF7IP2Q5U623 682 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 PCMTD2Q9NV79 361 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 PHTF1Q9UMS5 762 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 B3GAT3O94766 335 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 GHRP10912 638 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 BMP6P22004 513 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 DNAJC3Q13217 504 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 TBCCQ15814 346 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 FASTKD1Q53R41 847 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 IQSEC1Q6DN90 963 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF467Q7Z7K2 595 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF507Q8TCN5 953 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 TMC2Q8TDI7 906 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 KCNK16Q96T55 309 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ABCF3Q9NUQ8 709 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 THG1LQ9NWX6 298 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 LOC102724159A0A0B4J2E5 919 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 PSMD3O43242 534 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 ASMTLO95671 621 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 PNPLA4P41247 253 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 MRPS35P82673 323 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 SKOR1P84550 965 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 MED21Q13503 144 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 PWP2Q15269 919 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 RAB42Q8N4Z0 105 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 KRT35Q92764 455 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 WNK4Q96J92 1243 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 KIFC3Q9BVG8 833 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 SIK2Q9H0K1 926 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 CDC42EP4Q9H3Q1 356 aaKnown RBP13.26□□□□□ -0.29
DNMT1-228ENST00000592705 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
DNMT1-228ENST00000592705 B2RBV5 119 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 GPD1P21695 349 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 SULT1E1P49888 294 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 SYCP2LQ5T4T6 812 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF662Q6ZS27 426 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 EIF1ADQ8N9N8 165 aaKnown RBP13.25□□□□□ -0.29
DNMT1-228ENST00000592705 HDAC7Q8WUI4 952 aa13.25□□□□□ -0.29
DNMT1-228ENST00000592705 E2F7Q96AV8 911 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms