RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 LONP2Q86WA8 852 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 DDIASQ8IXT1 998 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 OSMRQ99650 979 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC30A1Q9Y6M5 507 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC37A4O43826 429 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 MRPS35P82673 323 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 CDH18Q13634 790 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 Q4G0T1 1027 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF467Q7Z7K2 595 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 PCDHGB4Q9UN71 923 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 NCAM1P13591 858 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 TM4SF1P30408 202 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 FXR1P51114 621 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■■□□ 17.4
SMARCA4-216ENST00000591545 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 JAMLQ86YT9 394 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 STX19Q8N4C7 294 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 KIAA1257Q9ULG3 409 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 F5H423 210 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 EFCAB14O75071 495 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 ATP6V1E1P36543 226 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 PSEN2P49810 448 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 SYTL3Q4VX76 610 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF555Q8NEP9 628 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 CPA5Q8WXQ8 436 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 FBXO32Q969P5 355 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 MRPL1Q9BYD6 325 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 PAK5Q9P286 719 aa13.87□□□□□ -0.19
SMARCA4-216ENST00000591545 TMEM88BA6NKF7 163 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 CYB561D2O14569 222 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 AP1G2O75843 785 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ENO1P06733 434 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 RALBP11234 206 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 AKT1P31749 480 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 KCNA1Q09470 495 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 THAP11Q96EK4 314 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 NEU2Q9Y3R4 380 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 A0A087WZ62 844 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC15A5A6NIM6 579 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF185O15231 689 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 MBL2P11226 248 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 GARTP22102 1010 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 GPAT2Q6NUI2 795 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 USP38Q8NB14 1042 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 L3MBTL3Q96JM7 780 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 FDXACB1Q9BRP7 624 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 NEUROG2Q9H2A3 272 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ZC3H7BQ9UGR2 993 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 CCT8L1PA6NM43 557 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 LY6KQ17RY6 165 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 CYFIP2Q96F07 1278 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ERGIC2Q96RQ1 377 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 UBR1Q8IWV7 1749 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ALDH18A1P54886 795 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 RBBP7Q16576 425 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 RAD9BQ6WBX8 426 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 SZRD1Q7Z422 152 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 SH2D3CQ8N5H7 860 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 KCNQ5Q9NR82 932 aa13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCA4-216ENST00000591545 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 RSPH10B2B2RC85 870 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 KCNN4O15554 427 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 ATP9BO43861 1147 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 KRT8P05787 483 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 RSPH10BP0C881 870 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 AVPR1AP37288 418 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 LHX1P48742 406 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 ERP44Q9BS26 406 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 RUBCNLQ9H714 662 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 AGPAT3Q9NRZ7 376 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 GPD1P21695 349 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 GTF2H1P32780 548 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 HSPA13P48723 471 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 KDSRQ06136 332 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 ZNF177Q13360 481 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 REPS2Q8NFH8 660 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 SLC30A5Q8TAD4 765 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 UBA3Q8TBC4 463 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 ARL8AQ96BM9 186 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-216ENST00000591545 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms