RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	FAM111B	Q6SJ93	734 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	RSRC2	Q7L4I2	434 aa	Known RBP	5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	LRRTM4	Q86VH4	590 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	GATAD2A	Q86YP4	633 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	C2CD5	Q86YS7	1000 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	CPO	Q8IVL8	374 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	FTSJ3	Q8IY81	847 aa	Known RBP	5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	ESX1	Q8N693	406 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	SIMC1	Q8NDZ2	872 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	SCAMP5	Q8TAC9	235 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	LRRC37B	Q96QE4	947 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	MESP1	Q9BRJ9	268 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	DHX36	Q9H2U1	1008 aa	Known RBP	5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	SMOC2	Q9H3U7	446 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	ZCCHC4	Q9H5U6	513 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	ETAA1	Q9NY74	926 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	POGK	Q9P215	609 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	SWAP70	Q9UH65	585 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	FEM1B	Q9UK73	627 aa		5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	MTO1	Q9Y2Z2	717 aa	Known RBP	5.72	□□□□□ -1.49
ATP9B-223	ENST00000590608	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	MROH6	A6NGR9	719 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	PRR5-ARHGAP8	B1AHC4	643 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	hCG_1984214	I3L0E3	225 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	PCDH17	O14917	1159 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	KCNQ3	O43525	872 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	DNPH1	O43598	174 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	RRP9	O43818	475 aa	Known RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	B4GALT3	O60512	393 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	MBD4	O95243	580 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	RASAL1	O95294	804 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	CHEK2	O96017	543 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	IDE	P14735	1019 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	NPPB	P16860	134 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	HK1	P19367	917 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	KLRK1	P26718	216 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	MST1	P26927	711 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	VIPR2	P41587	438 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	TUB	P50607	506 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	RAC3	P60763	192 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	KRT17	Q04695	432 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	FBXO47	Q5MNV8	452 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	INTS11	Q5TA45	600 aa	Known RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	EFCAB12	Q6NXP0	572 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	RRAGA	Q7L523	313 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	GPRIN1	Q7Z2K8	1008 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	ZFPM1	Q8IX07	1006 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	SP8	Q8IXZ3	490 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	CFAP52	Q8N1V2	620 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	MB21D1	Q8N884	522 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	PSD4	Q8NDX1	1056 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	ZFP28	Q8NHY6	868 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	FEZF2	Q8TBJ5	459 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	CPT1C	Q8TCG5	803 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	CSGALNACT1	Q8TDX6	532 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	ZNF384	Q8TF68	577 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	AFG1L	Q8WV93	481 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	NEIL1	Q96FI4	390 aa	Predicted RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	MARS2	Q96GW9	593 aa	Known RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	LRIG1	Q96JA1	1093 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	PYM1	Q9BRP8	204 aa	Known RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	RIC8A	Q9NPQ8	531 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	USP40	Q9NVE5	1235 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	KIF17	Q9P2E2	1029 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	OAZ3	Q9UMX2	235 aa		5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	MRPS17	Q9Y2R5	130 aa	Known RBP	5.71	□□□□□ -1.5
ATP9B-223	ENST00000590608	CCDC78	A2IDD5	438 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	OTOL1	A6NHN0	477 aa	Predicted RBP	5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	DRGX	A6NNA5	263 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	SNX2	O60749	519 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	PIAS2	O75928	621 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	ACTL6B	O94805	426 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	LMNA	P02545	664 aa	Known RBP	5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	LDHC	P07864	332 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	ITGA2B	P08514	1039 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	ATP1A3	P13637	1013 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	YY1	P25490	414 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	MPP1	Q00013	466 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	SURF1	Q15526	300 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	FAM110C	Q1W6H9	321 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	PTCHD3	Q3KNS1	767 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	FAXC	Q5TGI0	409 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	ANKRD45	Q5TZF3	282 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	RETSAT	Q6NUM9	610 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	TAPT1	Q6NXT6	567 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	TAF2	Q6P1X5	1199 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	FAM83A	Q86UY5	434 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	GAS2L3	Q86XJ1	694 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	SYT12	Q8IV01	421 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	EID2B	Q96D98	161 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	TRIB1	Q96RU8	372 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	SEC62	Q99442	399 aa	Known RBP	5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	NEU1	Q99519	415 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	SLC26A6	Q9BXS9	759 aa		5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	PABPC3	Q9H361	631 aa	Known RBP	5.7	□□□□□ -1.5
ATP9B-223	ENST00000590608	NELFA	Q9H3P2	528 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms