RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CLGNO14967 610 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 NKRFO15226 690 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 SULT1E1P49888 294 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 TATDN1Q6P1N9 297 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 PRUNE1Q86TP1 453 aa17.89■□□□□ 0.45
SMARCA4-215ENST00000590574 WDR49Q8IV35 697 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 CCNYL1Q8N7R7 359 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 HPDLQ96IR7 371 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 PPP1R36Q96LQ0 422 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 MYLK2Q9H1R3 596 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 SYNPO2Q9UMS6 1093 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 LAMB4A4D0S4 1761 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 ATP9BO43861 1147 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 DPEP1P16444 411 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 STILQ15468 1287 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 LRRC36Q1X8D7 754 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 JADE1Q6IE81 842 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 RAB44Q7Z6P3 723 aaPredicted RBP17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 EXOC3L1Q86VI1 746 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 ZCCHC9Q8N567 271 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 IL31RAQ8NI17 732 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 CKAP2Q8WWK9 683 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 PRCCQ92733 491 aaPredicted RBP17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 ZBTB45Q96K62 511 aaPredicted RBP17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 AGAP3Q96P47 875 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 GEMIN8Q9NWZ8 242 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 KIF3CO14782 793 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 BACE1P56817 501 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 KATNAL2Q8IYT4 538 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 VCPIP1Q96JH7 1222 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 SHOC2Q9UQ13 582 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 INPP5FQ9Y2H2 1132 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 AFG3L2Q9Y4W6 797 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 MYH2Q9UKX2 1941 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 ZBTB7AO95365 584 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 ITGB5P18084 799 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 MMP13P45452 471 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 RCN1Q15293 331 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 TMEM161BQ8NDZ6 487 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 CHST13Q8NET6 341 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 MRIQ9BWK5 157 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 AJAP1Q9UKB5 411 aaPredicted RBP17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 PLIN4Q96Q06 1357 aa17.88■□□□□ 0.45
SMARCA4-215ENST00000590574 ENO4A6NNW6 628 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 GTSE1Q9NYZ3 720 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 CRYMQ14894 314 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 FGD4Q96M96 766 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 PCDHA2Q9Y5H9 948 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 SNED1Q8TER0 1413 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 PPP1R12AO14974 1030 aaPredicted RBP17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 PDGFRBP09619 1106 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 MYL2P10916 166 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 ETS1P14921 441 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 SSTR1P30872 391 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 GMPSP49915 693 aaPredicted RBP17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 SIX2Q9NPC8 291 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 GRIN2DO15399 1336 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 LRRC6Q86X45 466 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 RYBPQ8N488 228 aaPredicted RBP17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 MTBPQ96DY7 904 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 EFHD1Q9BUP0 239 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 TMEM120AQ9BXJ8 343 aa17.87■□□□□ 0.45
SMARCA4-215ENST00000590574 LRP6O75581 1613 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 BGNP21810 368 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 KCNA3P22001 575 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 VHLP40337 213 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 MAMLD1Q13495 774 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 NFIL3Q16649 462 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 THEGQ9P2T0 379 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 USP18Q9UMW8 372 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 PYGBP11216 843 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 GPATCH2LQ9NWQ4 482 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 VWA5AO00534 786 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 KLC3Q6P597 504 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 EXT2Q93063 718 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 KIAA1683Q9H0B3 1180 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 F8VP50 259 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 MTFR1Q15390 333 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 KRT80Q6KB66 452 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 CCDC33Q8N5R6 958 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 ICA1LQ8NDH6 482 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 C10orf88Q9H8K7 445 aa17.86■□□□□ 0.45
SMARCA4-215ENST00000590574 TCRBV7S2A1N4TA0A589 114 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 TM9SF1O15321 606 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 UGCGQ16739 394 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 KREMEN1Q96MU8 473 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 BCAS3Q9H6U6 928 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 SLC15A2Q16348 729 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 MPZL3Q6UWV2 235 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 TCP10LQ8TDR4 215 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 PRMT7Q9NVM4 692 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 UBIAD1Q9Y5Z9 338 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 PTPN4P29074 926 aa17.85■□□□□ 0.45
SMARCA4-215ENST00000590574 RPA3P35244 121 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms