RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CPSF3Q9UKF6 684 aaKnown RBP18.69■□□□□ 0.58
RETREG3-210ENST00000590541 MAGED2Q9UNF1 606 aaPredicted RBP18.69■□□□□ 0.58
RETREG3-210ENST00000590541 LHX6Q9UPM6 363 aa18.69■□□□□ 0.58
RETREG3-210ENST00000590541 ZNF638Q14966 1978 aaKnown RBP18.69■□□□□ 0.58
RETREG3-210ENST00000590541 THADAQ6YHU6 1953 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 SCN1AP35498 2009 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 NPHP3-ACAD11A0A0J9YXS1 232 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 ANTXRLA6NF34 631 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 HNRNPDLO14979 420 aaKnown RBP18.68■□□□□ 0.58
RETREG3-210ENST00000590541 PIGRP01833 764 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 FAM160A1Q05DH4 1040 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 EML3Q32P44 896 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 WSCD1Q658N2 575 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 METTL23Q86XA0 190 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 PYM1Q9BRP8 204 aaKnown RBP18.68■□□□□ 0.58
RETREG3-210ENST00000590541 KCND2Q9NZV8 630 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 NEUROG3Q9Y4Z2 214 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 WNT6Q9Y6F9 365 aa18.68■□□□□ 0.58
RETREG3-210ENST00000590541 PKD1L2Q7Z442 2459 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 A0A0B4J269 797 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 H0YCG3 227 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 HYAL3O43820 417 aaPredicted RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 CSH1P0DML2 217 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 CSH2P0DML3 217 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 DHPSP49366 369 aaPredicted RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 USP4Q13107 963 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 TMEM132DQ14C87 1099 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 ZRSR1Q15695 479 aaKnown RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 SDHAF4Q5VUM1 108 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 ANO7Q6IWH7 933 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 SLC39A4Q6P5W5 647 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 DCP1BQ8IZD4 617 aaKnown RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 USP33Q8TEY7 942 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 PIGKQ92643 395 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 ATP2A3Q93084 1043 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 SLC22A12Q96S37 553 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 CYP2S1Q96SQ9 504 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 PI4K2AQ9BTU6 479 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 MSTO1Q9BUK6 570 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 CCSER1Q9C0I3 900 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 LARSQ9P2J5 1176 aaKnown RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 EVLQ9UI08 416 aaPredicted RBP18.67■□□□□ 0.58
RETREG3-210ENST00000590541 DERAQ9Y315 318 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 PCDHB5Q9Y5E4 795 aa18.67■□□□□ 0.58
RETREG3-210ENST00000590541 K7EQS6 105 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 IFNAR2P48551 515 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 TAF6P49848 677 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 ARSHQ5FYA8 562 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 MDGA1Q8NFP4 955 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 INTS4Q96HW7 963 aaKnown RBP18.66■□□□□ 0.58
RETREG3-210ENST00000590541 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 PLIN2Q99541 437 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 KLK13Q9UKR3 277 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 MSRB2Q9Y3D2 182 aa18.66■□□□□ 0.58
RETREG3-210ENST00000590541 FASNP49327 2511 aaKnown RBP18.65■□□□□ 0.58
RETREG3-210ENST00000590541 VWA3AA6NCI4 1184 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
RETREG3-210ENST00000590541 PLA2G4BP0C869 781 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 C2orf27AQ580R0 203 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 TRIM61Q5EBN2 209 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 TTC16Q8NEE8 873 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 OLIG1Q8TAK6 271 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 LINC00597Q9H2U6 94 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 ASB7Q9H672 318 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 TRPC7Q9HCX4 862 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 C2CD2Q9Y426 696 aa18.65■□□□□ 0.58
RETREG3-210ENST00000590541 PTPRDP23468 1912 aa18.64■□□□□ 0.58
RETREG3-210ENST00000590541 ASCC3Q8N3C0 2202 aaKnown RBP18.64■□□□□ 0.57
RETREG3-210ENST00000590541 NOL4O94818 638 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 USP17L7P0C7H9 530 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.57
RETREG3-210ENST00000590541 OPRD1P41143 372 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 SEC13P55735 322 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 LMAN2Q12907 356 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 CRY1Q16526 586 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 DDR2Q16832 855 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 EFCAB13Q8IY85 973 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 CCDC26Q8TAB7 109 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 TRMT2BQ96GJ1 504 aaKnown RBP18.64■□□□□ 0.57
RETREG3-210ENST00000590541 MYRFLQ96LU7 910 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 SLC32A1Q9H598 525 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 TMEM206Q9H813 350 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 TMEM74BQ9NUR3 256 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 DPP3Q9NY33 737 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 GCNT4Q9P109 453 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 UXTQ9UBK9 157 aaPredicted RBP18.64■□□□□ 0.57
RETREG3-210ENST00000590541 MMP17Q9ULZ9 603 aa18.64■□□□□ 0.57
RETREG3-210ENST00000590541 DMXL2Q8TDJ6 3036 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 TCHHQ07283 1943 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 SPAARA0A1B0GVQ0 90 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 KPNA7A9QM74 516 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 TAF4O00268 1085 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 CKMP06732 381 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 LONP1P36776 959 aaKnown RBP18.63■□□□□ 0.57
RETREG3-210ENST00000590541 UBA7P41226 1012 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 ACOT2P49753 483 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 NR1H3Q13133 447 aa18.63■□□□□ 0.57
RETREG3-210ENST00000590541 GAB4Q2WGN9 574 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms