RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 PNMA6AP0CW24 399 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-213ENST00000590315 UCHL3P15374 230 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 BDNFP23560 247 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 CYP2F1P24903 491 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 GRIK1P39086 918 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 RAD23BP54727 409 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 TWF1Q12792 350 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 PLD1Q13393 1074 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 DRAP1Q14919 205 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-213ENST00000590315 VEPH1Q14D04 833 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 SGO2Q562F6 1265 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 TMC5Q6UXY8 1006 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 FAM35AQ86V20 835 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 C12orf29Q8N999 325 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 SLC4A11Q8NBS3 891 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 SLC2A14Q8TDB8 520 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 WHAMMQ8TF30 809 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 HLA-CQ95604 372 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 B3GNT5Q9BYG0 378 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 GANQ9H2C0 597 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 FAM124BQ9H5Z6 455 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-213ENST00000590315 KRT82Q9NSB4 513 aa13.67□□□□□ -0.22
DDX39A-213ENST00000590315 TCF20Q9UGU0 1960 aaKnown RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 EPHB6O15197 1021 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 THAP12O43422 761 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 XYLBO75191 536 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 ZMYND10O75800 440 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 ACO1P21399 889 aaKnown RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 BRD2P25440 801 aaKnown RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 GNA15P30679 374 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 SSTR3P32745 418 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 TUFMP49411 452 aaKnown RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 EPHB3P54753 998 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 DLX2Q07687 328 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 IFRD2Q12894 506 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 NR1I3Q14994 352 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 GOLGA7BQ2TAP0 167 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 CES5AQ6NT32 575 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 FAM171BQ6P995 826 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 LILRA6Q6PI73 481 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 UBR7Q8N806 425 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 GIPC2Q8TF65 315 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 SMG7Q92540 1137 aaKnown RBP13.66□□□□□ -0.22
DDX39A-213ENST00000590315 CYFIP2Q96F07 1278 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 SMARCD1Q96GM5 515 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 ZNF518BQ9C0D4 1074 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 CRISPLD1Q9H336 500 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 CD207Q9UJ71 328 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 SZT2Q5T011 3432 aa13.66□□□□□ -0.22
DDX39A-213ENST00000590315 ANAPC1Q9H1A4 1944 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 A0A1W2PQC6 194 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 CYP26A1O43174 497 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 AP1G2O75843 785 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 GFPT2O94808 682 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 VNN2O95498 520 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 PAEPP09466 180 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 TPM1P09493 284 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 HAPLN1P10915 354 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-213ENST00000590315 VDRP11473 427 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 GPR15P49685 360 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
DDX39A-213ENST00000590315 ARID5AQ03989 594 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 DDR2Q16832 855 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 PPP1R26Q5T8A7 1209 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-213ENST00000590315 SDHAF4Q5VUM1 108 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 TCEAL8Q8IYN2 117 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 STKLD1Q8NE28 680 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 GPR152Q8TDT2 470 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 HDAC7Q8WUI4 952 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 CPLX3Q8WVH0 158 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 SHC3Q92529 594 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 FUBP3Q96I24 572 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX39A-213ENST00000590315 PKMYT1Q99640 499 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 CEP72Q9P209 647 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 HESX1Q9UBX0 185 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 MAFFQ9ULX9 164 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 MAGED2Q9UNF1 606 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-213ENST00000590315 DAAM1Q9Y4D1 1078 aa13.65□□□□□ -0.22
DDX39A-213ENST00000590315 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 BRWD1Q9NSI6 2320 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 F8VZ95 297 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 M0QYV0 167 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 FOXN3O00409 490 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 TRIM66O15016 1216 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 MED7O43513 233 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 NOL4O94818 638 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 HOXB8P17481 243 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-213ENST00000590315 STAT1P42224 750 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 PDE6CP51160 858 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 MAP3K7CLP57077 242 aa13.64□□□□□ -0.23
DDX39A-213ENST00000590315 SLC8A3P57103 927 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms