RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
VPS25-204ENST00000589577 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 GOLGA8AA7E2F4 631 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 GOLGA8BA8MQT2 603 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 M0QZQ0 153 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 M0R2N6 131 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ACKR2O00590 384 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 CPLX1O14810 134 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 RRP8O43159 456 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 DKC1O60832 514 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS25-204ENST00000589577 CILPO75339 1184 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 TADA3O75528 432 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 DGAT1O75907 488 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 SLITRK3O94933 977 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 F11P03951 625 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ZNF883P0CG24 379 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 HMGA1P17096 107 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 RPS6KB1P23443 525 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 MAOBP27338 520 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 MCM4P33991 863 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 AVPR1AP37288 418 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 RARRES1P49788 294 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 NLRP12P59046 1061 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 MRPS21P82921 87 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 YWHAHQ04917 246 aaPredicted RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 BFSP1Q12934 665 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ZNF268Q14587 947 aaPredicted RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 EPHA7Q15375 998 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 DCAF4L1Q3SXM0 396 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 PKDCCQ504Y2 493 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 NT5DC1Q5TFE4 455 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 CC2D1AQ6P1N0 951 aaPredicted RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 MOXD1Q6UVY6 613 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ITIH5Q86UX2 942 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ERICH1Q86X53 443 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 EFCAB13Q8IY85 973 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 RASEFQ8IZ41 740 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 SPRYD3Q8NCJ5 442 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 STKLD1Q8NE28 680 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 APPL2Q8NEU8 664 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 OXER1Q8TDS5 423 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 CCDC12Q8WUD4 166 aaPredicted RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 SPIRE2Q8WWL2 714 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 KCNB2Q92953 911 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ATP2A3Q93084 1043 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 EXOC4Q96A65 974 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ACAP3Q96P50 834 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 SLC22A12Q96S37 553 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ARID3AQ99856 593 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ADPGKQ9BRR6 497 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 LINC00597Q9H2U6 94 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ZSWIM4Q9H7M6 989 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ZSWIM6Q9HCJ5 1215 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 CD248Q9HCU0 757 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 TM7SF3Q9NS93 570 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 DUS2Q9NX74 493 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 VPS54Q9P1Q0 977 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 ANKMY1Q9P2S6 941 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 DDX25Q9UHL0 483 aaKnown RBP6.63□□□□□ -1.35
VPS25-204ENST00000589577 KIF3AQ9Y496 699 aa6.63□□□□□ -1.35
VPS25-204ENST00000589577 TCHHQ07283 1943 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 CENPEQ02224 2701 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 A0A087WWV3 80 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 FAM205CA6NFA0 338 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 TRIM66O15016 1216 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 FLRT2O43155 660 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 USO1O60763 962 aaKnown RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 LYPLA2O95372 231 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 GP1BBP13224 206 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 KCNE1P15382 129 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 RPL9P32969 192 aaKnown RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 TIE1P35590 1138 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 GRM5P41594 1212 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 AARSP49588 968 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS25-204ENST00000589577 OSTNP61366 133 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 RHDQ02161 417 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 CCDC173Q0VFZ6 552 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 BYSLQ13895 437 aaKnown RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 RTP5Q14D33 572 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 NPY5RQ15761 445 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 SLC36A4Q6YBV0 504 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 Q6ZUG5 572 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 PRICKLE2Q7Z3G6 844 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 C12orf40Q86WS4 652 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 TMPRSS12Q86WS5 348 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 OR10T2Q8NGX3 314 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 CCDC26Q8TAB7 109 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 BICD2Q8TD16 824 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 RHBDD1Q8TEB9 315 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 GIPC2Q8TF65 315 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 BAP1Q92560 729 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 ZNF419Q96HQ0 510 aaPredicted RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 ZSCAN31Q96LW9 406 aaPredicted RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 GCNAQ96QF7 691 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 KIF2CQ99661 725 aa6.62□□□□□ -1.35
VPS25-204ENST00000589577 SEPT5Q99719 369 aaPredicted RBP6.62□□□□□ -1.35
VPS25-204ENST00000589577 CDC6Q99741 560 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms