RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 LMO2P25791 158 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 CDC25CP30307 473 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 NUBP1P53384 320 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 STIM1Q13586 685 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 DDR2Q16832 855 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 PHLDB3Q6NSJ2 640 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 SCN4BQ8IWT1 228 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 CCDC105Q8IYK2 499 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-209ENST00000589214 MKNK1Q9BUB5 465 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 TRMT61BQ9BVS5 477 aaKnown RBP16.26■□□□□ 0.19
ERCC1-209ENST00000589214 XYLT2Q9H1B5 865 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 SNX25Q9H3E2 840 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 CRTAC1Q9NQ79 661 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.192e-12■■■■■ 298.1
ERCC1-209ENST00000589214 NXF1Q9UBU9 619 aaKnown RBP16.26■□□□□ 0.19
ERCC1-209ENST00000589214 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 MAGED2Q9UNF1 606 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-209ENST00000589214 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
ERCC1-209ENST00000589214 MIA3Q5JRA6 1907 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 HEPACAM2A8MVW5 462 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PSMA7O14818 248 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 MAPK13O15264 365 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 DCNP07585 359 aaKnown RBP16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PDGFRBP09619 1106 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 KRT13P13646 458 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PSMC3P17980 439 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 GDI1P31150 447 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 GCLMP48507 274 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 AP3M2P53677 418 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 STX17P56962 302 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PRKCQQ04759 706 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PPP3CAQ08209 521 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 NCOA4Q13772 614 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 CFAP221Q4G0U5 840 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 SCARA5Q6ZMJ2 495 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 C4orf50Q6ZRC1 276 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 TPRG1Q6ZUI0 275 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 INTS8Q75QN2 995 aaKnown RBP16.25■□□□□ 0.19
ERCC1-209ENST00000589214 SV2AQ7L0J3 742 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PJA1Q8NG27 643 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 OR6B3Q8NGW1 331 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 DNASE1L2Q92874 299 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-209ENST00000589214 FUBP3Q96I24 572 aaKnown RBP eCLIP16.25■□□□□ 0.19
ERCC1-209ENST00000589214 SHDQ96IW2 340 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 GTPBP4Q9BZE4 634 aaKnown RBP16.25■□□□□ 0.19
ERCC1-209ENST00000589214 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 SMYD3Q9H7B4 428 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 TRPV4Q9HBA0 871 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 HEBP1Q9NRV9 189 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
ERCC1-209ENST00000589214 PTPRDP23468 1912 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 LRRN2O75325 713 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 TACC1O75410 805 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 STAU1O95793 577 aaKnown RBP16.24■□□□□ 0.19
ERCC1-209ENST00000589214 CSH1P0DML2 217 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 CSH2P0DML3 217 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 EPB41P11171 864 aaKnown RBP16.24■□□□□ 0.19
ERCC1-209ENST00000589214 HMGA1P17096 107 aaKnown RBP16.24■□□□□ 0.19
ERCC1-209ENST00000589214 ATICP31939 592 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 STARD6P59095 220 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 FKBP3Q00688 224 aaKnown RBP16.24■□□□□ 0.19
ERCC1-209ENST00000589214 CYP27A1Q02318 531 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 UBXN2BQ14CS0 331 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 ZACNQ401N2 412 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 MDH1BQ5I0G3 518 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
ERCC1-209ENST00000589214 YAF2Q8IY57 180 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 DTWD2Q8NBA8 298 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 GPT2Q8TD30 523 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 PHOX2BQ99453 314 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 DUSP9Q99956 384 aaKnown RBP16.24■□□□□ 0.19
ERCC1-209ENST00000589214 DPEP3Q9H4B8 488 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 SIT1Q9Y3P8 196 aa16.24■□□□□ 0.19
ERCC1-209ENST00000589214 KANSL1LA0AUZ9 987 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 DPYSL4O14531 572 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 IKBKBO14920 756 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 ZNF263O14978 683 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 HLA-DRAP01903 254 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 CD72P21854 359 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 RAP1GAPP47736 663 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 CDH8P55286 799 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 NLRP12P59046 1061 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 LRRC63Q05C16 580 aa16.23■□□□□ 0.19
ERCC1-209ENST00000589214 MAPRE1Q15691 268 aaKnown RBP16.23■□□□□ 0.19
ERCC1-209ENST00000589214 ZNF667Q5HYK9 610 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms